Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 RN7SKP263-201ENST00000411194 309 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 MTND2P16-201ENST00000419987 799 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC062016.2-201ENST00000420950 676 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AL356276.2-201ENST00000435919 558 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC108729.1-201ENST00000487812 947 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC010460.2-201ENST00000509054 677 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 MTCYBP37-201ENST00000510642 1133 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC026402.1-201ENST00000513642 170 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 TRAV15-201ENST00000556680 249 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC005412.1-201ENST00000580812 1049 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC023043.4-201ENST00000612081 449 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC008083.4-201ENST00000615076 444 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 MIR8059-201ENST00000620427 81 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AC091905.2-201ENST00000623143 306 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 AP001002.2-201ENST00000625137 386 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDL3P58872 A2MP1-204ENST00000566278 4130 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RHBDL3P58872 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 AC000374.1-201ENST00000434698 1745 ntBASIC5.2□□□□□ -1.58
RHBDL3P58872 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.2□□□□□ -1.58
RHBDL3P58872 MFSD8-242ENST00000641690 4199 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AL022311.1-201ENST00000623726 19416 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDL3P58872 RNU6-216P-201ENST00000363282 104 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 RNU6-374P-201ENST00000364146 108 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 SNORA51.6-201ENST00000384151 125 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 SNORA74C-2-201ENST00000411179 201 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 RPS20P14-201ENST00000412545 360 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AC092832.1-201ENST00000422934 400 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 RPS6P12-201ENST00000432491 726 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 BTF3P10-201ENST00000433415 495 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 ELOCP18-201ENST00000434209 337 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 HMGB3P30-201ENST00000457863 606 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 RPL35AP15-201ENST00000468042 339 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDL3P58872 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDL3P58872 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.19□□□□□ -1.58
RHBDL3P58872 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC125611.1-201ENST00000549563 229 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL389895.1-201ENST00000554127 252 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC022662.1-201ENST00000580252 331 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AC006116.5-201ENST00000591936 559 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 AC025588.3-201ENST00000604182 274 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL160290.3-201ENST00000604869 165 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL353600.1-201ENST00000608148 251 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL021997.2-201ENST00000615674 271 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AL078595.3-201ENST00000623815 1166 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
RHBDL3P58872 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 AC109315.1-201ENST00000584143 1347 ntBASIC5.19□□□□□ -1.58
RHBDL3P58872 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RHBDL3P58872 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RHBDL3P58872 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RHBDL3P58872 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 XIAPP3-201ENST00000312918 795 ntBASIC5.18□□□□□ -1.58
RHBDL3P58872 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RHBDL3P58872 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RHBDL3P58872 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDL3P58872 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms