Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RPS4XP2-201ENST00000458402 793 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.41□□□□□ -1.7
RIPK4P57078 LARP7P4-201ENST00000481075 878 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 METTL15P1-201ENST00000481421 1045 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AL358832.1-201ENST00000497800 389 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RIPK4P57078 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 NDUFB9P3-201ENST00000521269 501 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AL845331.3-202ENST00000562856 261 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 MIR4276-201ENST00000584832 70 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.41□□□□□ -1.7
RIPK4P57078 AL135786.2-201ENST00000608422 615 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.41□□□□□ -1.7
RIPK4P57078 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RIPK4P57078 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.41□□□□□ -1.7
RIPK4P57078 AC110792.3-201ENST00000595906 1614 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 CR383658.2-201ENST00000547576 1525 ntBASIC4.41□□□□□ -1.7
RIPK4P57078 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RIPK4P57078 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RIPK4P57078 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIPK4P57078 RNU6-618P-201ENST00000363518 112 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 RN7SKP285-201ENST00000410137 318 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 HMGN1P24-201ENST00000412282 298 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIPK4P57078 AL158156.1-201ENST00000422509 473 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 TXNP1-201ENST00000441872 371 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 AC008264.1-201ENST00000447612 367 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 RPL12P26-201ENST00000452430 487 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.4□□□□□ -1.71
RIPK4P57078 PCBP2P3-201ENST00000509726 843 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RIPK4P57078 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.4□□□□□ -1.71
RIPK4P57078 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.4□□□□□ -1.71
RIPK4P57078 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RIPK4P57078 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.4□□□□□ -1.71
RIPK4P57078 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.4□□□□□ -1.71
RIPK4P57078 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.4□□□□□ -1.71
RIPK4P57078 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.4□□□□□ -1.71
RIPK4P57078 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.4□□□□□ -1.71
RIPK4P57078 MIR5047-201ENST00000579212 100 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 MIR8058-201ENST00000615737 89 ntBASIC4.4□□□□□ -1.71
RIPK4P57078 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.4□□□□□ -1.71
RIPK4P57078 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIPK4P57078 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.4□□□□□ -1.71
RIPK4P57078 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RIPK4P57078 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RIPK4P57078 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RIPK4P57078 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 RNA5SP120-201ENST00000410900 112 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC126124.2-201ENST00000413542 321 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 RPL7P53-201ENST00000421245 739 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.39□□□□□ -1.71
RIPK4P57078 RPF2P1-201ENST00000424137 906 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.39□□□□□ -1.71
RIPK4P57078 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.39□□□□□ -1.71
RIPK4P57078 RPL7P38-201ENST00000488396 739 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 HMGB1P21-201ENST00000502313 581 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC020893.1-201ENST00000502452 580 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 NDUFB4P9-201ENST00000511646 388 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK4P57078 MIR2276-201ENST00000516886 89 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC092868.3-201ENST00000560515 784 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.39□□□□□ -1.71
RIPK4P57078 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.39□□□□□ -1.71
RIPK4P57078 AL031985.2-201ENST00000600955 480 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.39□□□□□ -1.71
RIPK4P57078 AL162713.1-201ENST00000604480 262 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AL159169.3-201ENST00000608871 561 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK4P57078 AC016911.1-201ENST00000613297 452 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 AL354976.1-201ENST00000613843 387 ntBASIC4.39□□□□□ -1.71
RIPK4P57078 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RIPK4P57078 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RIPK4P57078 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK4P57078 ZNF826P-207ENST00000622273 1910 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK4P57078 RNA5SP387-201ENST00000364226 106 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 RNU6-328P-201ENST00000390887 106 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 SNORD65-201ENST00000391079 73 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 AL356968.1-201ENST00000416622 474 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK4P57078 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.38□□□□□ -1.71
RIPK4P57078 FTH1P9-201ENST00000513251 355 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 RN7SKP116-201ENST00000516902 319 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 AC104997.1-201ENST00000519761 717 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK4P57078 UBE2NP1-201ENST00000545592 458 ntBASIC4.38□□□□□ -1.71
RIPK4P57078 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK4P57078 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK4P57078 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.38□□□□□ -1.71
RIPK4P57078 AC245128.3-201ENST00000594721 748 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms