Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH6P55285 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC074367.1-201ENST00000438685 1125 ntBASIC3.74□□□□□ -1.81
CDH6P55285 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 RRM2P4-201ENST00000441721 562 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.74□□□□□ -1.81
CDH6P55285 RPL21P133-201ENST00000443666 476 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC097499.1-201ENST00000444277 208 ntBASIC3.74□□□□□ -1.81
CDH6P55285 ARL5AP2-201ENST00000444698 533 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 PPIAP3-201ENST00000450588 505 ntBASIC3.74□□□□□ -1.81
CDH6P55285 HMGB3P30-201ENST00000457863 606 ntBASIC3.74□□□□□ -1.81
CDH6P55285 RPL37P6-202ENST00000464216 403 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 HMGN1P11-201ENST00000508668 303 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH6P55285 RNU2-58P-201ENST00000516403 183 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH6P55285 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH6P55285 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH6P55285 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH6P55285 AC090751.1-201ENST00000566966 267 ntBASIC3.74□□□□□ -1.81
CDH6P55285 MIR4738-201ENST00000579134 87 ntBASIC3.74□□□□□ -1.81
CDH6P55285 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH6P55285 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH6P55285 AC113194.1-201ENST00000606037 500 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AL391497.1-201ENST00000608671 547 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC119674.1-207ENST00000641355 633 ntBASIC3.74□□□□□ -1.81
CDH6P55285 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CDH6P55285 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH6P55285 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH6P55285 NMD3P1-201ENST00000439704 1488 ntBASIC3.73□□□□□ -1.81
CDH6P55285 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH6P55285 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH6P55285 RAD1P1-201ENST00000231383 813 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH6P55285 MTATP6P31-201ENST00000406985 692 ntBASIC3.73□□□□□ -1.81
CDH6P55285 SDCBPP2-201ENST00000424643 885 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH6P55285 RPS29P31-201ENST00000446147 164 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC092685.1-201ENST00000447960 1243 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH6P55285 RNU7-170P-201ENST00000459303 61 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC084357.1-201ENST00000473404 255 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC092451.1-201ENST00000480211 153 ntBASIC3.73□□□□□ -1.81
CDH6P55285 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH6P55285 HMGB3P14-201ENST00000494195 599 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH6P55285 AC005351.1-201ENST00000511152 786 ntBASIC3.73□□□□□ -1.81
CDH6P55285 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH6P55285 RNU6-579P-201ENST00000516879 102 ntBASIC3.73□□□□□ -1.81
CDH6P55285 RN7SKP234-201ENST00000517173 224 ntBASIC3.73□□□□□ -1.81
CDH6P55285 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CDH6P55285 RANP9-201ENST00000519957 271 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH6P55285 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH6P55285 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH6P55285 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH6P55285 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH6P55285 AC007687.1-201ENST00000602704 304 ntBASIC3.73□□□□□ -1.81
CDH6P55285 RNA5SP108-201ENST00000605921 117 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC104820.1-201ENST00000624183 307 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC009501.3-201ENST00000605001 1352 ntBASIC3.73□□□□□ -1.81
CDH6P55285 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH6P55285 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH6P55285 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH6P55285 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CDH6P55285 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH6P55285 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 AL161912.2-201ENST00000565707 3007 ntBASIC3.72□□□□□ -1.81
CDH6P55285 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDH6P55285 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH6P55285 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH6P55285 RNA5SP51-201ENST00000364750 119 ntBASIC3.72□□□□□ -1.81
CDH6P55285 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH6P55285 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH6P55285 RNU6ATAC-201ENST00000408749 126 ntBASIC3.72□□□□□ -1.81
CDH6P55285 RN7SKP202-201ENST00000410439 330 ntBASIC3.72□□□□□ -1.81
CDH6P55285 MTND4P22-201ENST00000413116 1169 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH6P55285 AC007389.2-201ENST00000434630 306 ntBASIC3.72□□□□□ -1.81
CDH6P55285 XKRY2-201ENST00000442362 1093 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH6P55285 RPS3AP46-201ENST00000448352 682 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AL136097.1-201ENST00000456945 913 ntBASIC3.72□□□□□ -1.81
CDH6P55285 RPL7L1P8-201ENST00000469911 741 ntBASIC3.72□□□□□ -1.81
CDH6P55285 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms