Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH4P55283 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDH4P55283 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDH4P55283 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH4P55283 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH4P55283 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDH4P55283 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH4P55283 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH4P55283 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH4P55283 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 RNA5SP51-201ENST00000364750 119 ntBASIC3.78□□□□□ -1.8
CDH4P55283 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 OR52E6-202ENST00000379946 954 ntBASIC3.78□□□□□ -1.8
CDH4P55283 SNORA5A-201ENST00000384111 134 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH4P55283 RN7SKP27-201ENST00000410684 333 ntBASIC3.78□□□□□ -1.8
CDH4P55283 ARL2BPP3-201ENST00000421226 480 ntBASIC3.78□□□□□ -1.8
CDH4P55283 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH4P55283 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH4P55283 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH4P55283 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 RPS3AP46-201ENST00000448352 682 ntBASIC3.78□□□□□ -1.8
CDH4P55283 MTND2P25-201ENST00000449028 610 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH4P55283 RPL23AP23-201ENST00000452590 471 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC099563.1-201ENST00000456086 418 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 AP002812.1-201ENST00000495378 474 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH4P55283 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 RPL7L1P13-201ENST00000511702 739 ntBASIC3.78□□□□□ -1.8
CDH4P55283 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH4P55283 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH4P55283 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH4P55283 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH4P55283 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 AC139103.1-201ENST00000534696 1030 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC008011.1-201ENST00000545989 227 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC093014.1-201ENST00000548926 724 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
CDH4P55283 MIR1254-2-201ENST00000579553 63 ntBASIC3.78□□□□□ -1.8
CDH4P55283 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.78□□□□□ -1.8
CDH4P55283 AC104307.1-201ENST00000616142 196 ntBASIC3.78□□□□□ -1.8
CDH4P55283 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 AC006065.5-201ENST00000623427 349 ntBASIC3.78□□□□□ -1.8
CDH4P55283 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH4P55283 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH4P55283 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH4P55283 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
CDH4P55283 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH4P55283 AL122126.1-201ENST00000546905 1318 ntBASIC3.77□□□□□ -1.81
CDH4P55283 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH4P55283 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH4P55283 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH4P55283 RNU6-1293P-201ENST00000384077 107 ntBASIC3.77□□□□□ -1.81
CDH4P55283 SNORA70E-201ENST00000384492 135 ntBASIC3.77□□□□□ -1.81
CDH4P55283 DNAJC19P6-201ENST00000401853 280 ntBASIC3.77□□□□□ -1.81
CDH4P55283 AL356057.1-202ENST00000402263 756 ntBASIC3.77□□□□□ -1.81
CDH4P55283 HMGB3P18-201ENST00000406327 590 ntBASIC3.77□□□□□ -1.81
CDH4P55283 ATP5A1P2-201ENST00000412323 255 ntBASIC3.77□□□□□ -1.81
CDH4P55283 NUP35P2-201ENST00000416748 943 ntBASIC3.77□□□□□ -1.81
CDH4P55283 HMGB3P20-201ENST00000417997 600 ntBASIC3.77□□□□□ -1.81
CDH4P55283 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH4P55283 AC245054.1-201ENST00000420944 258 ntBASIC3.77□□□□□ -1.81
CDH4P55283 RPS26P40-201ENST00000435209 294 ntBASIC3.77□□□□□ -1.81
CDH4P55283 HMGB1P48-201ENST00000446155 598 ntBASIC3.77□□□□□ -1.81
CDH4P55283 PPIAP3-201ENST00000450588 505 ntBASIC3.77□□□□□ -1.81
CDH4P55283 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 MTND2P6-201ENST00000455337 1030 ntBASIC3.77□□□□□ -1.81
CDH4P55283 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH4P55283 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
CDH4P55283 AC008494.2-201ENST00000514544 370 ntBASIC3.77□□□□□ -1.81
CDH4P55283 RN7SKP18-201ENST00000516005 275 ntBASIC3.77□□□□□ -1.81
CDH4P55283 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 RANP9-201ENST00000519957 271 ntBASIC3.77□□□□□ -1.81
CDH4P55283 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH4P55283 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH4P55283 AC004775.1-201ENST00000607389 753 ntBASIC3.77□□□□□ -1.81
CDH4P55283 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 RNU6-156P-201ENST00000621869 107 ntBASIC3.77□□□□□ -1.81
CDH4P55283 AL356490.1-201ENST00000623079 479 ntBASIC3.77□□□□□ -1.81
CDH4P55283 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH4P55283 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH4P55283 AC119744.1-201ENST00000454746 1715 ntBASIC3.77□□□□□ -1.81
CDH4P55283 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH4P55283 HSPA8P1-201ENST00000425843 1833 ntBASIC3.77□□□□□ -1.81
CDH4P55283 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH4P55283 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH4P55283 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH4P55283 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH4P55283 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH4P55283 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH4P55283 AL359837.1-201ENST00000381357 287 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms