Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC034159.1-201ENST00000513885 583 ntBASIC5.71□□□□□ -1.5
PMS1P54277 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.71□□□□□ -1.5
PMS1P54277 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.71□□□□□ -1.5
PMS1P54277 AC008127.2-201ENST00000549925 1075 ntBASIC5.71□□□□□ -1.5
PMS1P54277 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.71□□□□□ -1.5
PMS1P54277 AC127024.5-201ENST00000580085 462 ntBASIC5.71□□□□□ -1.5
PMS1P54277 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.71□□□□□ -1.5
PMS1P54277 AL390208.1-201ENST00000605885 644 ntBASIC5.71□□□□□ -1.5
PMS1P54277 AC079395.2-201ENST00000610982 737 ntBASIC5.71□□□□□ -1.5
PMS1P54277 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.71□□□□□ -1.5
PMS1P54277 AC109309.2-201ENST00000612597 332 ntBASIC5.71□□□□□ -1.5
PMS1P54277 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.71□□□□□ -1.5
PMS1P54277 AC104260.1-201ENST00000616660 539 ntBASIC5.71□□□□□ -1.5
PMS1P54277 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PMS1P54277 AL022578.1-201ENST00000439330 1433 ntBASIC5.71□□□□□ -1.5
PMS1P54277 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
PMS1P54277 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.71□□□□□ -1.5
PMS1P54277 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PMS1P54277 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
PMS1P54277 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 MAPK10-338ENST00000641647 3362 ntBASIC5.7□□□□□ -1.5
PMS1P54277 U8.3-201ENST00000363321 132 ntBASIC5.7□□□□□ -1.5
PMS1P54277 Y_RNA.295-201ENST00000364918 102 ntBASIC5.7□□□□□ -1.5
PMS1P54277 RNU6-921P-201ENST00000384361 107 ntBASIC5.7□□□□□ -1.5
PMS1P54277 MT-TL1-201ENST00000386347 75 ntBASIC5.7□□□□□ -1.5
PMS1P54277 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PMS1P54277 SNORD115.1-201ENST00000391109 76 ntBASIC5.7□□□□□ -1.5
PMS1P54277 RNA5SP178-201ENST00000410380 128 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC245054.1-201ENST00000420944 258 ntBASIC5.7□□□□□ -1.5
PMS1P54277 RAD23BP1-201ENST00000421404 1227 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 RPL23AP16-201ENST00000441715 421 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.7□□□□□ -1.5
PMS1P54277 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.7□□□□□ -1.5
PMS1P54277 HIGD1AP8-201ENST00000453927 274 ntBASIC5.7□□□□□ -1.5
PMS1P54277 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 SETP20-201ENST00000457046 852 ntBASIC5.7□□□□□ -1.5
PMS1P54277 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.7□□□□□ -1.5
PMS1P54277 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.7□□□□□ -1.5
PMS1P54277 AL133445.1-201ENST00000467051 452 ntBASIC5.7□□□□□ -1.5
PMS1P54277 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.7□□□□□ -1.5
PMS1P54277 PGAM1P13-201ENST00000507497 754 ntBASIC5.7□□□□□ -1.5
PMS1P54277 RNU2-46P-201ENST00000517038 113 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.7□□□□□ -1.5
PMS1P54277 OR5M2P-201ENST00000529003 936 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.7□□□□□ -1.5
PMS1P54277 AL157687.1-201ENST00000554853 619 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AL133457.1-201ENST00000564251 987 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC069307.1-201ENST00000602820 447 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AL049634.3-201ENST00000604968 457 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AL365503.1-201ENST00000605247 905 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC016727.1-205ENST00000605437 569 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC009994.1-201ENST00000606889 253 ntBASIC5.7□□□□□ -1.5
PMS1P54277 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.7□□□□□ -1.5
PMS1P54277 U6.101-201ENST00000637707 76 ntBASIC5.7□□□□□ -1.5
PMS1P54277 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 AC073869.10-201ENST00000642016 354 ntBASIC5.7□□□□□ -1.5
PMS1P54277 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PMS1P54277 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PMS1P54277 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
PMS1P54277 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PMS1P54277 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PMS1P54277 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PMS1P54277 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
PMS1P54277 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PMS1P54277 AC027228.2-201ENST00000567141 2154 ntBASIC5.69□□□□□ -1.5
PMS1P54277 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PMS1P54277 AC019072.1-201ENST00000604535 1551 ntBASIC5.69□□□□□ -1.5
PMS1P54277 AC008033.1-201ENST00000216407 1162 ntBASIC5.69□□□□□ -1.5
PMS1P54277 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PMS1P54277 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
PMS1P54277 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PMS1P54277 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PMS1P54277 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PMS1P54277 RNU6-952P-201ENST00000391164 108 ntBASIC5.69□□□□□ -1.5
PMS1P54277 AL035079.1-201ENST00000405210 287 ntBASIC5.69□□□□□ -1.5
PMS1P54277 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.69□□□□□ -1.5
PMS1P54277 USP9YP27-201ENST00000418455 438 ntBASIC5.69□□□□□ -1.5
PMS1P54277 PIGFP2-201ENST00000421400 651 ntBASIC5.69□□□□□ -1.5
PMS1P54277 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.69□□□□□ -1.5
PMS1P54277 MTCO1P20-201ENST00000425366 358 ntBASIC5.69□□□□□ -1.5
PMS1P54277 AL445669.1-201ENST00000426743 755 ntBASIC5.69□□□□□ -1.5
PMS1P54277 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.69□□□□□ -1.5
PMS1P54277 AC009238.2-201ENST00000431026 355 ntBASIC5.69□□□□□ -1.5
PMS1P54277 MTCYBP45-201ENST00000435243 565 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms