Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MIR622-201ENST00000638396 96 ntBASIC4.47□□□□□ -1.69
CLTCL1P53675 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CLTCL1P53675 RPS4XP5-202ENST00000449995 1334 ntBASIC4.47□□□□□ -1.69
CLTCL1P53675 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLTCL1P53675 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CLTCL1P53675 RN7SKP220-201ENST00000410611 288 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 RNU6-55P-201ENST00000411092 107 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 RNU6-954P-201ENST00000411355 107 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.46□□□□□ -1.69
CLTCL1P53675 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLTCL1P53675 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.46□□□□□ -1.69
CLTCL1P53675 VWA8P1-201ENST00000510889 176 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 RNA5SP356-201ENST00000515972 94 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.46□□□□□ -1.69
CLTCL1P53675 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.46□□□□□ -1.69
CLTCL1P53675 AC009948.4-201ENST00000604692 675 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 RMST_8.1-201ENST00000610287 165 ntBASIC4.46□□□□□ -1.69
CLTCL1P53675 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.46□□□□□ -1.69
CLTCL1P53675 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.69
CLTCL1P53675 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLTCL1P53675 AC090971.4-201ENST00000560291 1800 ntBASIC4.46□□□□□ -1.7
CLTCL1P53675 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLTCL1P53675 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.46□□□□□ -1.7
CLTCL1P53675 NACA3P-201ENST00000359690 648 ntBASIC4.46□□□□□ -1.7
CLTCL1P53675 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.46□□□□□ -1.7
CLTCL1P53675 AC009812.2-201ENST00000517657 457 ntBASIC4.46□□□□□ -1.7
CLTCL1P53675 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.46□□□□□ -1.7
CLTCL1P53675 uc_338.1-201ENST00000612113 180 ntBASIC4.46□□□□□ -1.7
CLTCL1P53675 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLTCL1P53675 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLTCL1P53675 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.45□□□□□ -1.7
CLTCL1P53675 HSPA8P1-201ENST00000425843 1833 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 AC096644.4-201ENST00000563417 2912 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 MIR423-201ENST00000362201 94 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 SNORA71.1-201ENST00000364523 117 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.45□□□□□ -1.7
CLTCL1P53675 MTND4LP20-201ENST00000402379 270 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 RPL5P18-201ENST00000406671 891 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 AL603766.1-201ENST00000407763 664 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 AMD1P2-201ENST00000412936 992 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 RANP4-201ENST00000413361 655 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 AC140076.1-201ENST00000449897 361 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLTCL1P53675 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.45□□□□□ -1.7
CLTCL1P53675 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.45□□□□□ -1.7
CLTCL1P53675 AL008729.2-201ENST00000606393 473 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 OR5BR1P-201ENST00000524992 1330 ntBASIC4.45□□□□□ -1.7
CLTCL1P53675 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.45□□□□□ -1.7
CLTCL1P53675 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.45□□□□□ -1.7
CLTCL1P53675 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLTCL1P53675 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLTCL1P53675 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
CLTCL1P53675 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.44□□□□□ -1.7
CLTCL1P53675 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLTCL1P53675 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.44□□□□□ -1.7
CLTCL1P53675 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.44□□□□□ -1.7
CLTCL1P53675 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.44□□□□□ -1.7
CLTCL1P53675 AC018552.3-201ENST00000567416 561 ntBASIC4.44□□□□□ -1.7
CLTCL1P53675 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.44□□□□□ -1.7
CLTCL1P53675 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLTCL1P53675 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLTCL1P53675 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
CLTCL1P53675 RIOK3P1-201ENST00000418778 1528 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLTCL1P53675 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLTCL1P53675 OR52B1P-201ENST00000316506 909 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 RNU6-7-201ENST00000364784 107 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 RNU6-8-201ENST00000365467 107 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.43□□□□□ -1.7
CLTCL1P53675 S100A11P1-201ENST00000477525 312 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 RPS4XP13-201ENST00000483219 789 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 OR2A20P-203ENST00000498397 1268 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLTCL1P53675 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.43□□□□□ -1.7
CLTCL1P53675 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.43□□□□□ -1.7
CLTCL1P53675 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.43□□□□□ -1.7
CLTCL1P53675 IGHV3-29-201ENST00000604817 344 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLTCL1P53675 MTND4P10-201ENST00000446199 1363 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLTCL1P53675 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.43□□□□□ -1.7
CLTCL1P53675 SPATA2P1-201ENST00000431223 2055 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.43□□□□□ -1.7
CLTCL1P53675 AL353692.2-201ENST00000407054 335 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 BX679664.1-201ENST00000434429 253 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 HMGB3P11-201ENST00000440127 604 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 RPS4XP22-201ENST00000480755 780 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.43□□□□□ -1.7
CLTCL1P53675 RN7SKP132-201ENST00000516001 208 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.43□□□□□ -1.7
CLTCL1P53675 GTF3AP2-201ENST00000557014 266 ntBASIC4.43□□□□□ -1.7
CLTCL1P53675 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.42□□□□□ -1.7
CLTCL1P53675 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CLTCL1P53675 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLTCL1P53675 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLTCL1P53675 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.42□□□□□ -1.7
CLTCL1P53675 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.42□□□□□ -1.7
CLTCL1P53675 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
CLTCL1P53675 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.42□□□□□ -1.7
CLTCL1P53675 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms