Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNA5SP246-201ENST00000458909 119 ntBASIC4.07□□□□□ -1.76
PDX1P52945 SNORD11.1-201ENST00000459482 85 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC079804.1-201ENST00000461922 436 ntBASIC4.07□□□□□ -1.76
PDX1P52945 RPL23AP44-201ENST00000482216 473 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC126121.1-201ENST00000482313 553 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC146944.2-203ENST00000502493 354 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC084024.2-201ENST00000503480 791 ntBASIC4.07□□□□□ -1.76
PDX1P52945 FTH1P24-201ENST00000503502 462 ntBASIC4.07□□□□□ -1.76
PDX1P52945 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 PGBD4P4-201ENST00000509673 613 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AC139495.1-202ENST00000513164 354 ntBASIC4.07□□□□□ -1.76
PDX1P52945 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
PDX1P52945 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.07□□□□□ -1.76
PDX1P52945 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.07□□□□□ -1.76
PDX1P52945 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 NF1P5-201ENST00000588287 448 ntBASIC4.07□□□□□ -1.76
PDX1P52945 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.07□□□□□ -1.76
PDX1P52945 AL390816.3-201ENST00000604527 1066 ntBASIC4.07□□□□□ -1.76
PDX1P52945 MIR7151-201ENST00000617477 60 ntBASIC4.07□□□□□ -1.76
PDX1P52945 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.07□□□□□ -1.76
PDX1P52945 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
PDX1P52945 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PDX1P52945 OR1S1-201ENST00000624470 978 ntBASIC4.07□□□□□ -1.76
PDX1P52945 AC055839.1-201ENST00000634467 498 ntBASIC4.07□□□□□ -1.76
PDX1P52945 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.07□□□□□ -1.76
PDX1P52945 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.07□□□□□ -1.76
PDX1P52945 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDX1P52945 AL450326.2-201ENST00000421913 1962 ntBASIC4.07□□□□□ -1.76
PDX1P52945 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDX1P52945 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PDX1P52945 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDX1P52945 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDX1P52945 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDX1P52945 snoZ40.1-201ENST00000364540 72 ntBASIC4.06□□□□□ -1.76
PDX1P52945 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDX1P52945 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 RN7SKP159-201ENST00000410657 292 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC108032.1-201ENST00000416706 207 ntBASIC4.06□□□□□ -1.76
PDX1P52945 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 RPL7P2-201ENST00000427639 268 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.06□□□□□ -1.76
PDX1P52945 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
PDX1P52945 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 TPTE2P3-201ENST00000441562 1189 ntBASIC4.06□□□□□ -1.76
PDX1P52945 HMGB1P16-201ENST00000447155 540 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC079776.3-201ENST00000450665 370 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 RPL23AP81-201ENST00000455252 467 ntBASIC4.06□□□□□ -1.76
PDX1P52945 RPS15AP1-201ENST00000457423 391 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 AC011352.3-201ENST00000505162 593 ntBASIC4.06□□□□□ -1.76
PDX1P52945 STMN1P2-201ENST00000508435 439 ntBASIC4.06□□□□□ -1.76
PDX1P52945 NPM1P41-201ENST00000512920 831 ntBASIC4.06□□□□□ -1.76
PDX1P52945 HIGD1AP6-201ENST00000521833 279 ntBASIC4.06□□□□□ -1.76
PDX1P52945 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
PDX1P52945 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.06□□□□□ -1.76
PDX1P52945 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDX1P52945 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.06□□□□□ -1.76
PDX1P52945 AC234772.3-201ENST00000602277 528 ntBASIC4.06□□□□□ -1.76
PDX1P52945 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.06□□□□□ -1.76
PDX1P52945 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.06□□□□□ -1.76
PDX1P52945 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDX1P52945 AC087683.2-201ENST00000611384 326 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC079395.3-201ENST00000615161 484 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC039056.2-201ENST00000622261 511 ntBASIC4.06□□□□□ -1.76
PDX1P52945 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.06□□□□□ -1.76
PDX1P52945 AC009452.1-201ENST00000640823 606 ntBASIC4.06□□□□□ -1.76
PDX1P52945 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDX1P52945 AP005901.5-201ENST00000545779 1796 ntBASIC4.06□□□□□ -1.76
PDX1P52945 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PDX1P52945 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.05□□□□□ -1.76
PDX1P52945 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDX1P52945 RNU1-15P-201ENST00000353977 144 ntBASIC4.05□□□□□ -1.76
PDX1P52945 RNA5SP391-201ENST00000363456 119 ntBASIC4.05□□□□□ -1.76
PDX1P52945 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.05□□□□□ -1.76
PDX1P52945 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.05□□□□□ -1.76
PDX1P52945 RNU6-1293P-201ENST00000384077 107 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms