Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.9□□□□□ -1.79
CASP4P49662 AC090337.1-201ENST00000579651 2074 ntBASIC3.9□□□□□ -1.79
CASP4P49662 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CASP4P49662 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CASP4P49662 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.89□□□□□ -1.79
CASP4P49662 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CASP4P49662 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CASP4P49662 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.89□□□□□ -1.79
CASP4P49662 RNU6-98P-201ENST00000384173 107 ntBASIC3.89□□□□□ -1.79
CASP4P49662 U3.39-201ENST00000408569 239 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.89□□□□□ -1.79
CASP4P49662 AC018644.1-201ENST00000429934 551 ntBASIC3.89□□□□□ -1.79
CASP4P49662 MTND4LP7-201ENST00000431728 294 ntBASIC3.89□□□□□ -1.79
CASP4P49662 ZFAND6P1-201ENST00000434138 605 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 AL513321.1-201ENST00000441175 761 ntBASIC3.89□□□□□ -1.79
CASP4P49662 EXTL2P1-201ENST00000446218 416 ntBASIC3.89□□□□□ -1.79
CASP4P49662 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.89□□□□□ -1.79
CASP4P49662 RPL23AP23-201ENST00000452590 471 ntBASIC3.89□□□□□ -1.79
CASP4P49662 RPL23AP73-201ENST00000492507 471 ntBASIC3.89□□□□□ -1.79
CASP4P49662 HMGB1P21-201ENST00000502313 581 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.89□□□□□ -1.79
CASP4P49662 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.89□□□□□ -1.79
CASP4P49662 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.89□□□□□ -1.79
CASP4P49662 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.89□□□□□ -1.79
CASP4P49662 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.89□□□□□ -1.79
CASP4P49662 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 AC233266.2-201ENST00000567067 528 ntBASIC3.89□□□□□ -1.79
CASP4P49662 MIR4644-201ENST00000579929 84 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AC004775.1-201ENST00000607389 753 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 U4.6-201ENST00000621618 127 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AL118508.4-201ENST00000624142 1176 ntBASIC3.89□□□□□ -1.79
CASP4P49662 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CASP4P49662 HSPA8P19-201ENST00000505359 1517 ntBASIC3.89□□□□□ -1.79
CASP4P49662 AL627171.1-201ENST00000618845 1308 ntBASIC3.89□□□□□ -1.79
CASP4P49662 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.89□□□□□ -1.79
CASP4P49662 EXOC5P1-201ENST00000510543 1969 ntBASIC3.89□□□□□ -1.79
CASP4P49662 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CASP4P49662 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
CASP4P49662 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASP4P49662 RNA5SP235-201ENST00000365411 114 ntBASIC3.88□□□□□ -1.79
CASP4P49662 RN7SKP53-201ENST00000411337 315 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC004022.2-201ENST00000413824 193 ntBASIC3.88□□□□□ -1.79
CASP4P49662 VTA1P1-201ENST00000414044 866 ntBASIC3.88□□□□□ -1.79
CASP4P49662 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.88□□□□□ -1.79
CASP4P49662 AC006989.1-201ENST00000427212 131 ntBASIC3.88□□□□□ -1.79
CASP4P49662 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.88□□□□□ -1.79
CASP4P49662 AC023347.2-201ENST00000433994 462 ntBASIC3.88□□□□□ -1.79
CASP4P49662 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.88□□□□□ -1.79
CASP4P49662 ANP32BP2-201ENST00000454525 545 ntBASIC3.88□□□□□ -1.79
CASP4P49662 FTH1P2-201ENST00000466086 412 ntBASIC3.88□□□□□ -1.79
CASP4P49662 FCF1P3-201ENST00000496394 590 ntBASIC3.88□□□□□ -1.79
CASP4P49662 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.88□□□□□ -1.79
CASP4P49662 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.88□□□□□ -1.79
CASP4P49662 AC103833.1-201ENST00000517442 172 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.88□□□□□ -1.79
CASP4P49662 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.88□□□□□ -1.79
CASP4P49662 AC015911.5-201ENST00000587076 451 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC067852.4-201ENST00000590314 478 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC135178.6-201ENST00000605314 398 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.88□□□□□ -1.79
CASP4P49662 AC245389.2-201ENST00000616023 576 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC243756.2-201ENST00000618406 463 ntBASIC3.88□□□□□ -1.79
CASP4P49662 AC242843.1-201ENST00000618702 573 ntBASIC3.88□□□□□ -1.79
CASP4P49662 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASP4P49662 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CASP4P49662 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 OTUD4P1-201ENST00000237841 3067 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AC068647.1-201ENST00000489539 2265 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AC066616.2-201ENST00000559334 1481 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
CASP4P49662 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CASP4P49662 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 TATDN1P1-201ENST00000414123 891 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.87□□□□□ -1.79
CASP4P49662 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.87□□□□□ -1.79
CASP4P49662 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 AL133547.1-201ENST00000448546 220 ntBASIC3.87□□□□□ -1.79
CASP4P49662 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.87□□□□□ -1.79
CASP4P49662 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 OR5H4P-201ENST00000510851 923 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.87□□□□□ -1.79
CASP4P49662 COX6B1P6-201ENST00000522347 255 ntBASIC3.87□□□□□ -1.79
CASP4P49662 MED28P5-201ENST00000528254 438 ntBASIC3.87□□□□□ -1.79
CASP4P49662 OR4C2P-201ENST00000530855 1064 ntBASIC3.87□□□□□ -1.79
CASP4P49662 AC092851.1-201ENST00000535964 478 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms