Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 HMGB1P28-201ENST00000507778 552 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC110792.2-201ENST00000510278 224 ntBASIC4.29□□□□□ -1.72
CENPAP49450 MTND1P22-201ENST00000510572 951 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.29□□□□□ -1.72
CENPAP49450 RNY4P37-201ENST00000516225 96 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.29□□□□□ -1.72
CENPAP49450 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.29□□□□□ -1.72
CENPAP49450 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.29□□□□□ -1.72
CENPAP49450 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.29□□□□□ -1.72
CENPAP49450 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CENPAP49450 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.29□□□□□ -1.72
CENPAP49450 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.29□□□□□ -1.72
CENPAP49450 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.29□□□□□ -1.72
CENPAP49450 PIGPP4-201ENST00000584447 307 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.29□□□□□ -1.72
CENPAP49450 MEMO1P5-201ENST00000604810 406 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC113194.1-201ENST00000606037 500 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC116651.1-201ENST00000609724 556 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC005962.2-201ENST00000611427 652 ntBASIC4.29□□□□□ -1.72
CENPAP49450 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.29□□□□□ -1.72
CENPAP49450 uc_338.18-201ENST00000615451 175 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AC099669.2-201ENST00000616549 437 ntBASIC4.29□□□□□ -1.72
CENPAP49450 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.29□□□□□ -1.72
CENPAP49450 AC098679.5-201ENST00000624394 571 ntBASIC4.29□□□□□ -1.72
CENPAP49450 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.29□□□□□ -1.72
CENPAP49450 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
CENPAP49450 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CENPAP49450 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CENPAP49450 AC066616.2-201ENST00000559334 1481 ntBASIC4.29□□□□□ -1.72
CENPAP49450 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.29□□□□□ -1.72
CENPAP49450 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CENPAP49450 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AL590763.1-201ENST00000398297 1545 ntBASIC4.28□□□□□ -1.72
CENPAP49450 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 EXOC5P1-201ENST00000510543 1969 ntBASIC4.28□□□□□ -1.72
CENPAP49450 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CENPAP49450 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 MIR1284-201ENST00000408337 120 ntBASIC4.28□□□□□ -1.72
CENPAP49450 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 LINC00993-201ENST00000420453 540 ntBASIC4.28□□□□□ -1.72
CENPAP49450 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 AL606662.1-201ENST00000445763 553 ntBASIC4.28□□□□□ -1.72
CENPAP49450 RPL23AP35-201ENST00000451906 501 ntBASIC4.28□□□□□ -1.72
CENPAP49450 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 AC108022.1-201ENST00000493466 478 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC025164.1-201ENST00000496249 478 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC104685.1-201ENST00000502445 371 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.28□□□□□ -1.72
CENPAP49450 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
CENPAP49450 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 MTCO1P49-201ENST00000523429 802 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
CENPAP49450 SLC2A13P1-201ENST00000531560 322 ntBASIC4.28□□□□□ -1.72
CENPAP49450 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CENPAP49450 AC090502.2-201ENST00000549267 280 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC133555.2-201ENST00000550213 292 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.28□□□□□ -1.72
CENPAP49450 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AC093249.4-201ENST00000564755 259 ntBASIC4.28□□□□□ -1.72
CENPAP49450 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 MIR4504-201ENST00000577413 92 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AP001180.3-201ENST00000582221 145 ntBASIC4.28□□□□□ -1.72
CENPAP49450 SNORD39.3-201ENST00000584451 71 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.28□□□□□ -1.72
CENPAP49450 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.28□□□□□ -1.72
CENPAP49450 IMMP1LP1-201ENST00000605170 488 ntBASIC4.28□□□□□ -1.72
CENPAP49450 COX6CP4-201ENST00000605798 228 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC091946.2-201ENST00000606105 291 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC080013.6-201ENST00000606185 215 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.28□□□□□ -1.72
CENPAP49450 AL354976.1-201ENST00000613843 387 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AF246928.1-201ENST00000623768 87 ntBASIC4.28□□□□□ -1.72
CENPAP49450 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CENPAP49450 AC120349.2-201ENST00000625002 298 ntBASIC4.28□□□□□ -1.72
CENPAP49450 AC092184.1-201ENST00000625042 715 ntBASIC4.28□□□□□ -1.72
CENPAP49450 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms