Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 BX005019.1-201ENST00000561881 1810 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL12P48061 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CXCL12P48061 MIR422A-201ENST00000362286 90 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 SNORA80A-201ENST00000363922 136 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 RNU6-7-201ENST00000364784 107 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 RNU6-8-201ENST00000365467 107 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 RNA5SP239-201ENST00000410218 129 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 HMGN1P24-201ENST00000412282 298 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL12P48061 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 MRPS18BP2-201ENST00000434310 759 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 ELOCP8-201ENST00000439309 332 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 ELOCP15-201ENST00000442090 332 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL12P48061 VN1R48P-201ENST00000448149 1036 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC097262.1-201ENST00000452559 548 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AL645939.1-201ENST00000453429 797 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 ANP32BP2-201ENST00000454525 545 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 DNAJC19P1-201ENST00000455312 319 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 RPL21P13-201ENST00000488305 481 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL12P48061 IGHV3-63-201ENST00000518422 341 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL12P48061 AP000926.4-201ENST00000527351 454 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL12P48061 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.45□□□□□ -1.86
CXCL12P48061 MIR3124-201ENST00000582636 67 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC034236.3-201ENST00000605999 461 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC019080.5-201ENST00000624891 757 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL12P48061 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL12P48061 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL12P48061 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL12P48061 AC004944.1-201ENST00000517807 3059 ntBASIC3.45□□□□□ -1.86
CXCL12P48061 DDX6P1-205ENST00000441966 1436 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL12P48061 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CXCL12P48061 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CXCL12P48061 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 U3.39-201ENST00000408569 239 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL12P48061 MTCO1P57-201ENST00000432182 261 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 ELOCP18-201ENST00000434209 337 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 MTCYBP29-201ENST00000436327 1006 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AL035551.1-201ENST00000446931 348 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 RSL24D1P3-201ENST00000449255 495 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.44□□□□□ -1.86
CXCL12P48061 RPL5P13-201ENST00000462840 709 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC096576.1-201ENST00000489014 359 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC109458.1-201ENST00000508858 316 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 RNU6-491P-201ENST00000516099 110 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.44□□□□□ -1.86
CXCL12P48061 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL12P48061 AC113192.3-201ENST00000529152 742 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 AC007424.1-203ENST00000554613 687 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL12P48061 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CXCL12P48061 MTCO2P22-201ENST00000603246 681 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 BRDTP1-201ENST00000605735 677 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC005021.1-201ENST00000608730 355 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 AC020658.4-201ENST00000613987 684 ntBASIC3.44□□□□□ -1.86
CXCL12P48061 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL12P48061 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL12P48061 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL12P48061 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
CXCL12P48061 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.44□□□□□ -1.86
CXCL12P48061 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL12P48061 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL12P48061 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL12P48061 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL12P48061 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL12P48061 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL12P48061 ARF4P3-201ENST00000397387 509 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 RPL5P18-201ENST00000406671 891 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AL512504.1-201ENST00000415494 778 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AC007563.3-201ENST00000433233 371 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 ATP5HP2-201ENST00000433885 485 ntBASIC3.43□□□□□ -1.86
CXCL12P48061 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.43□□□□□ -1.86
CXCL12P48061 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.43□□□□□ -1.86
CXCL12P48061 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CXCL12P48061 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 482.7 ms