Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 AC097504.1-201ENST00000515103 2415 ntBASIC4.41□□□□□ -1.7
HADHAP40939 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 RNU6-492P-201ENST00000363035 104 ntBASIC4.41□□□□□ -1.7
HADHAP40939 SNORA40.2-201ENST00000390847 128 ntBASIC4.41□□□□□ -1.7
HADHAP40939 MIR1250-201ENST00000408098 113 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC073264.1-201ENST00000411508 416 ntBASIC4.41□□□□□ -1.7
HADHAP40939 ELOCP19-201ENST00000411919 318 ntBASIC4.41□□□□□ -1.7
HADHAP40939 RPS3AP37-201ENST00000419176 745 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 AL356387.2-201ENST00000422272 243 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC092017.2-201ENST00000427600 362 ntBASIC4.41□□□□□ -1.7
HADHAP40939 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
HADHAP40939 FTH1P6-201ENST00000430768 320 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 SEPT7P5-201ENST00000434048 306 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 UBE2V1P3-201ENST00000439651 417 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC009963.2-201ENST00000453431 138 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 MTND2P28-201ENST00000457540 1044 ntBASIC4.41□□□□□ -1.7
HADHAP40939 RPL21P126-201ENST00000470049 478 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC020898.1-201ENST00000474167 787 ntBASIC4.41□□□□□ -1.7
HADHAP40939 GAPDHP36-201ENST00000480688 918 ntBASIC4.41□□□□□ -1.7
HADHAP40939 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.41□□□□□ -1.7
HADHAP40939 RPS6P4-201ENST00000494693 758 ntBASIC4.41□□□□□ -1.7
HADHAP40939 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 MTCYBP16-201ENST00000509187 1129 ntBASIC4.41□□□□□ -1.7
HADHAP40939 PARP4P3-201ENST00000510265 317 ntBASIC4.41□□□□□ -1.7
HADHAP40939 RNU6-415P-201ENST00000516252 97 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC027309.2-201ENST00000520566 192 ntBASIC4.41□□□□□ -1.7
HADHAP40939 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 AP001189.2-201ENST00000527320 189 ntBASIC4.41□□□□□ -1.7
HADHAP40939 OR5BC1P-201ENST00000529327 739 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AL049838.1-201ENST00000563647 981 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.41□□□□□ -1.7
HADHAP40939 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.41□□□□□ -1.7
HADHAP40939 MTCO2P2-201ENST00000591258 225 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 VN1R83P-201ENST00000595685 445 ntBASIC4.41□□□□□ -1.7
HADHAP40939 RPL12P25-202ENST00000598100 674 ntBASIC4.41□□□□□ -1.7
HADHAP40939 AC079587.1-201ENST00000603846 277 ntBASIC4.41□□□□□ -1.7
HADHAP40939 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HADHAP40939 AL356121.2-201ENST00000624715 780 ntBASIC4.41□□□□□ -1.7
HADHAP40939 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HADHAP40939 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.41□□□□□ -1.7
HADHAP40939 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HADHAP40939 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.41□□□□□ -1.7
HADHAP40939 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.41□□□□□ -1.7
HADHAP40939 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HADHAP40939 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HADHAP40939 AC099786.3-201ENST00000565735 1410 ntBASIC4.4□□□□□ -1.7
HADHAP40939 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.4□□□□□ -1.7
HADHAP40939 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HADHAP40939 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.4□□□□□ -1.7
HADHAP40939 OR4A15-201ENST00000314706 1035 ntBASIC4.4□□□□□ -1.71
HADHAP40939 ANAPC10P1-201ENST00000395991 556 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AL603766.1-201ENST00000407763 664 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.4□□□□□ -1.71
HADHAP40939 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
HADHAP40939 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.4□□□□□ -1.71
HADHAP40939 RPEP3-201ENST00000425462 676 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC005345.1-201ENST00000431868 217 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC091390.1-201ENST00000433904 331 ntBASIC4.4□□□□□ -1.71
HADHAP40939 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.4□□□□□ -1.71
HADHAP40939 EEF1A1P39-201ENST00000440791 250 ntBASIC4.4□□□□□ -1.71
HADHAP40939 RPL23AP16-201ENST00000441715 421 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.4□□□□□ -1.71
HADHAP40939 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.4□□□□□ -1.71
HADHAP40939 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.4□□□□□ -1.71
HADHAP40939 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.4□□□□□ -1.71
HADHAP40939 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.4□□□□□ -1.71
HADHAP40939 AL121877.1-201ENST00000453704 622 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
HADHAP40939 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.4□□□□□ -1.71
HADHAP40939 AC093267.1-201ENST00000489176 961 ntBASIC4.4□□□□□ -1.71
HADHAP40939 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HADHAP40939 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.4□□□□□ -1.71
HADHAP40939 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HADHAP40939 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.4□□□□□ -1.71
HADHAP40939 MTND2P32-201ENST00000521584 1038 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC090281.1-201ENST00000523019 276 ntBASIC4.4□□□□□ -1.71
HADHAP40939 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.4□□□□□ -1.71
HADHAP40939 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms