Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC097520.1-201ENST00000624435 385 ntBASIC4.52□□□□□ -1.69
HOXA13P31271 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA13P31271 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA13P31271 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA13P31271 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA13P31271 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA13P31271 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA13P31271 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HOXA13P31271 SGO1P1-201ENST00000603525 1447 ntBASIC4.52□□□□□ -1.69
HOXA13P31271 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HOXA13P31271 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA13P31271 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA13P31271 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA13P31271 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA13P31271 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 ZNF29P-201ENST00000225587 168 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXA13P31271 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA13P31271 SNORD116-12-201ENST00000384468 92 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 MIR30B-201ENST00000384850 88 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 MIR16-1-201ENST00000385271 89 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 HMGB3P5-201ENST00000428894 612 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 HIGD1AP4-201ENST00000430194 280 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.51□□□□□ -1.69
HOXA13P31271 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXA13P31271 AL031313.1-201ENST00000448435 256 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AC104689.1-201ENST00000473356 768 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AC069528.1-202ENST00000482888 637 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 AC017037.1-201ENST00000508460 471 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 MIR5708-201ENST00000579723 85 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
HOXA13P31271 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 AL390816.3-201ENST00000604527 1066 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AC243756.2-201ENST00000618406 463 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AC124312.6-202ENST00000623624 418 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AL773545.4-201ENST00000637262 310 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 AL513478.4-201ENST00000641636 310 ntBASIC4.51□□□□□ -1.69
HOXA13P31271 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXA13P31271 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXA13P31271 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXA13P31271 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXA13P31271 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA13P31271 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA13P31271 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HOXA13P31271 ZNF962P-201ENST00000443465 3140 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXA13P31271 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA13P31271 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA13P31271 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXA13P31271 MIR554-201ENST00000384874 96 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 OR51A3P-201ENST00000413596 924 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA13P31271 HIGD1AP12-201ENST00000427832 281 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 PPIAP17-201ENST00000438507 471 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA13P31271 AL009048.1-201ENST00000450437 298 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 OFD1P3Y-201ENST00000453312 783 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXA13P31271 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA13P31271 RPS3AP6-201ENST00000484430 795 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 RPL21P131-201ENST00000497298 483 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 TRAV31-201ENST00000502780 342 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXA13P31271 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 AC109471.1-201ENST00000511631 612 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA13P31271 RNU6-202P-201ENST00000515998 96 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 AP001207.2-201ENST00000519490 539 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA13P31271 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA13P31271 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXA13P31271 DEFB130C-202ENST00000530001 230 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA13P31271 MTND1P24-201ENST00000552175 861 ntBASIC4.5□□□□□ -1.69
HOXA13P31271 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXA13P31271 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXA13P31271 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms