Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLIP1P30622 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP1P30622 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP1P30622 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP1P30622 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP1P30622 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLIP1P30622 MIR423-201ENST00000362201 94 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 RN7SKP247-201ENST00000411094 308 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 RPL6P21-201ENST00000418672 846 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.97□□□□□ -1.61
CLIP1P30622 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP1P30622 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP1P30622 AL591623.2-201ENST00000449978 222 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 AC239809.1-201ENST00000450470 217 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.97□□□□□ -1.61
CLIP1P30622 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.97□□□□□ -1.61
CLIP1P30622 AC099506.2-201ENST00000623074 221 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 AC091903.1-201ENST00000624322 454 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 MIR622-201ENST00000638396 96 ntBASIC4.97□□□□□ -1.61
CLIP1P30622 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CLIP1P30622 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLIP1P30622 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP1P30622 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP1P30622 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP1P30622 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CLIP1P30622 RNU6-249P-201ENST00000363016 102 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CLIP1P30622 AC008065.1-201ENST00000428525 348 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 AC108734.1-201ENST00000439549 399 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP1P30622 AC105918.1-201ENST00000474399 838 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.96□□□□□ -1.62
CLIP1P30622 AC108078.3-201ENST00000502633 489 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 AP001207.2-201ENST00000519490 539 ntBASIC4.96□□□□□ -1.62
CLIP1P30622 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.96□□□□□ -1.62
CLIP1P30622 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.96□□□□□ -1.62
CLIP1P30622 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLIP1P30622 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP1P30622 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP1P30622 RPL35AP12-201ENST00000425362 338 ntBASIC4.95□□□□□ -1.62
CLIP1P30622 RPL7P48-201ENST00000461513 746 ntBASIC4.95□□□□□ -1.62
CLIP1P30622 CCDC75P1-201ENST00000469247 791 ntBASIC4.95□□□□□ -1.62
CLIP1P30622 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP1P30622 AC090281.1-201ENST00000523019 276 ntBASIC4.95□□□□□ -1.62
CLIP1P30622 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.95□□□□□ -1.62
CLIP1P30622 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP1P30622 AC006023.1-201ENST00000603944 259 ntBASIC4.95□□□□□ -1.62
CLIP1P30622 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP1P30622 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP1P30622 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CLIP1P30622 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLIP1P30622 RPL7P8-201ENST00000411964 730 ntBASIC4.94□□□□□ -1.62
CLIP1P30622 OR6K4P-201ENST00000423179 955 ntBASIC4.94□□□□□ -1.62
CLIP1P30622 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP1P30622 MTND6P5-201ENST00000448266 512 ntBASIC4.94□□□□□ -1.62
CLIP1P30622 SEPT7P3-201ENST00000455017 621 ntBASIC4.94□□□□□ -1.62
CLIP1P30622 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP1P30622 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP1P30622 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP1P30622 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP1P30622 AC009948.4-201ENST00000604692 675 ntBASIC4.94□□□□□ -1.62
CLIP1P30622 BMS1P21-201ENST00000634565 365 ntBASIC4.94□□□□□ -1.62
CLIP1P30622 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP1P30622 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP1P30622 OR1S2-201ENST00000302592 978 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 RN7SKP220-201ENST00000410611 288 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP1P30622 AC004801.2-202ENST00000463559 283 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 AC117440.1-201ENST00000474107 571 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 RPS29P26-201ENST00000477483 171 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 AC010374.2-201ENST00000512933 535 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 AC104027.1-201ENST00000521887 300 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP1P30622 AC010680.3-201ENST00000604215 520 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 AL008729.2-201ENST00000606393 473 ntBASIC4.93□□□□□ -1.62
CLIP1P30622 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP1P30622 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP1P30622 RIOK3P1-201ENST00000418778 1528 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 RNU1-75P-201ENST00000347264 129 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP1P30622 RAC1P3-201ENST00000416129 580 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP1P30622 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP1P30622 AL139132.1-201ENST00000431587 344 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 AC011242.1-201ENST00000433596 1158 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 RPL7P28-201ENST00000437739 740 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP1P30622 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP1P30622 AC068724.1-201ENST00000487100 792 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP1P30622 FABP5P12-201ENST00000515543 389 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP1P30622 H3F3AP1-201ENST00000559984 334 ntBASIC4.92□□□□□ -1.62
CLIP1P30622 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP1P30622 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP1P30622 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP1P30622 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLIP1P30622 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP1P30622 PPIAP17-201ENST00000438507 471 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms