Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.78□□□□□ -1.64
TM4SF1P30408 ZNF971P-201ENST00000562068 1249 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 MIR4472-2-201ENST00000582069 67 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AC002069.2-201ENST00000603580 883 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC104662.1-201ENST00000604448 511 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 AC109454.4-201ENST00000623411 649 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 AC007529.1-201ENST00000418574 2178 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 AC005005.4-201ENST00000623789 16698 ntBASIC4.78□□□□□ -1.64
TM4SF1P30408 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
TM4SF1P30408 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TM4SF1P30408 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
TM4SF1P30408 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM4SF1P30408 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM4SF1P30408 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TM4SF1P30408 AL512646.1-201ENST00000269395 1077 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AL603865.2-201ENST00000401679 213 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 CYCSP4-201ENST00000429682 331 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC023347.2-201ENST00000433994 462 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC234064.1-201ENST00000436312 247 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 MTND6P18-201ENST00000439477 513 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 HMGB1P37-201ENST00000439613 609 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC092641.1-201ENST00000440229 772 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 MTND1P33-201ENST00000446251 917 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 MTATP6P14-201ENST00000455189 673 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 HMGB1P38-201ENST00000490557 577 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 UBA52P3-201ENST00000491303 382 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 RPL30P11-201ENST00000495304 339 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AC104417.1-201ENST00000523974 751 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.77□□□□□ -1.65
TM4SF1P30408 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM4SF1P30408 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AC107016.1-201ENST00000550463 337 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 OR4U1P-201ENST00000554958 912 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.77□□□□□ -1.65
TM4SF1P30408 MIR4298-201ENST00000584380 73 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 BNIP3P39-201ENST00000601077 554 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AP003117.1-201ENST00000602771 554 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 AC091488.1-201ENST00000604239 660 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 AC024933.1-201ENST00000608472 348 ntBASIC4.77□□□□□ -1.65
TM4SF1P30408 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.77□□□□□ -1.65
TM4SF1P30408 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM4SF1P30408 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM4SF1P30408 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.77□□□□□ -1.65
TM4SF1P30408 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.77□□□□□ -1.65
TM4SF1P30408 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM4SF1P30408 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.76□□□□□ -1.65
TM4SF1P30408 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM4SF1P30408 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM4SF1P30408 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.76□□□□□ -1.65
TM4SF1P30408 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM4SF1P30408 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM4SF1P30408 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.76□□□□□ -1.65
TM4SF1P30408 SNORA48.2-201ENST00000390926 124 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AL391219.1-201ENST00000422570 483 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 MTCYBP15-201ENST00000433123 1127 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC073387.1-201ENST00000453261 709 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AC008155.2-201ENST00000464337 397 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AC008885.2-201ENST00000509506 930 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AC008837.1-201ENST00000511513 412 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AC008494.2-201ENST00000514544 370 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AC118942.1-201ENST00000529674 1035 ntBASIC4.76□□□□□ -1.65
TM4SF1P30408 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.76□□□□□ -1.65
TM4SF1P30408 AC006363.1-201ENST00000603806 463 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms