Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AC087808.1-201ENST00000520501 361 ntBASIC6.51□□□□□ -1.37
RXRBP28702 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.51□□□□□ -1.37
RXRBP28702 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 PCMTD1P2-201ENST00000565017 355 ntBASIC6.51□□□□□ -1.37
RXRBP28702 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
RXRBP28702 YWHAQP7-201ENST00000603536 658 ntBASIC6.51□□□□□ -1.37
RXRBP28702 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.812-201ENST00000610788 101 ntBASIC6.51□□□□□ -1.37
RXRBP28702 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.784-201ENST00000613803 101 ntBASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.787-201ENST00000616522 101 ntBASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.780-201ENST00000617336 101 ntBASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.801-201ENST00000619005 101 ntBASIC6.51□□□□□ -1.37
RXRBP28702 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.51□□□□□ -1.37
RXRBP28702 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RXRBP28702 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RXRBP28702 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.5□□□□□ -1.37
RXRBP28702 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RXRBP28702 SPRR2C-201ENST00000290702 219 ntBASIC6.5□□□□□ -1.37
RXRBP28702 SNORA63.1-201ENST00000362493 131 ntBASIC6.5□□□□□ -1.37
RXRBP28702 Y_RNA.529-201ENST00000384586 119 ntBASIC6.5□□□□□ -1.37
RXRBP28702 MIR142-201ENST00000384835 87 ntBASIC6.5□□□□□ -1.37
RXRBP28702 U3.30-201ENST00000391308 210 ntBASIC6.5□□□□□ -1.37
RXRBP28702 SNORA77-201ENST00000408716 125 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC017078.1-201ENST00000416146 368 ntBASIC6.5□□□□□ -1.37
RXRBP28702 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.5□□□□□ -1.37
RXRBP28702 ZYG11AP1-201ENST00000430329 837 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.5□□□□□ -1.37
RXRBP28702 RPL7P31-201ENST00000450192 724 ntBASIC6.5□□□□□ -1.37
RXRBP28702 RPL23AP35-201ENST00000451906 501 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.5□□□□□ -1.37
RXRBP28702 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.5□□□□□ -1.37
RXRBP28702 RPL23AP37-201ENST00000479658 549 ntBASIC6.5□□□□□ -1.37
RXRBP28702 RPL7P24-201ENST00000493052 752 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC114786.4-201ENST00000508771 728 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.5□□□□□ -1.37
RXRBP28702 AC108120.2-201ENST00000512973 294 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.5□□□□□ -1.37
RXRBP28702 RNA5SP392-201ENST00000516905 112 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.5□□□□□ -1.37
RXRBP28702 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.5□□□□□ -1.37
RXRBP28702 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.5□□□□□ -1.37
RXRBP28702 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.5□□□□□ -1.37
RXRBP28702 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.5□□□□□ -1.37
RXRBP28702 AC073091.2-201ENST00000603205 907 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AC069200.1-201ENST00000609511 323 ntBASIC6.5□□□□□ -1.37
RXRBP28702 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.5□□□□□ -1.37
RXRBP28702 AL359880.1-201ENST00000621879 266 ntBASIC6.5□□□□□ -1.37
RXRBP28702 AP000648.2-201ENST00000624182 404 ntBASIC6.5□□□□□ -1.37
RXRBP28702 MIR6863-201ENST00000636112 90 ntBASIC6.5□□□□□ -1.37
RXRBP28702 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.5□□□□□ -1.37
RXRBP28702 MIR492-201ENST00000638676 116 ntBASIC6.5□□□□□ -1.37
RXRBP28702 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.5□□□□□ -1.37
RXRBP28702 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RXRBP28702 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RXRBP28702 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RXRBP28702 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RXRBP28702 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 AC003985.2-201ENST00000562268 1669 ntBASIC6.49□□□□□ -1.37
RXRBP28702 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 AC104964.3-201ENST00000606115 2860 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AL034370.1-201ENST00000397254 1590 ntBASIC6.49□□□□□ -1.37
RXRBP28702 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RXRBP28702 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.49□□□□□ -1.37
RXRBP28702 Y_RNA.89-201ENST00000363031 102 ntBASIC6.49□□□□□ -1.37
RXRBP28702 SNORA9-201ENST00000384215 133 ntBASIC6.49□□□□□ -1.37
RXRBP28702 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.49□□□□□ -1.37
RXRBP28702 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RXRBP28702 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 AC007742.1-201ENST00000425789 329 ntBASIC6.49□□□□□ -1.37
RXRBP28702 ELOCP14-201ENST00000428070 331 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.49□□□□□ -1.37
RXRBP28702 HMGB1P45-201ENST00000435986 653 ntBASIC6.49□□□□□ -1.37
RXRBP28702 ELOCP26-201ENST00000436067 329 ntBASIC6.49□□□□□ -1.37
RXRBP28702 CYCSP11-201ENST00000436426 315 ntBASIC6.49□□□□□ -1.37
RXRBP28702 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms