Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 MTND4P34-201ENST00000572715 1371 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ABCD3P28288 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 Z98745.1-201ENST00000402553 494 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 RNA5SP56-201ENST00000410277 118 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 RN7SKP106-201ENST00000410832 272 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 TPT1P2-201ENST00000413105 503 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.3□□□□□ -1.72
ABCD3P28288 AL590139.1-201ENST00000416267 400 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC012065.2-201ENST00000421295 375 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 AC073335.1-201ENST00000427776 363 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC127537.2-201ENST00000439258 465 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC073264.2-201ENST00000448886 166 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AL513533.1-201ENST00000453728 415 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 USP9YP10-201ENST00000454868 628 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 CYCSP34-201ENST00000458172 304 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC010326.1-201ENST00000462726 602 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 RPL7AP28-201ENST00000464513 571 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 RPL12P20-201ENST00000475538 479 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 RPS23P1-201ENST00000491662 432 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 MTCYBP17-201ENST00000503579 789 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 USP9YP5-201ENST00000511770 630 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 AC104986.1-201ENST00000517978 436 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 AC107954.1-201ENST00000565906 727 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 LARP7P2-201ENST00000575306 125 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.3□□□□□ -1.72
ABCD3P28288 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.3□□□□□ -1.72
ABCD3P28288 NIFKP6-201ENST00000598115 845 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AC103881.1-201ENST00000603476 538 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 IGHV3-29-201ENST00000604817 344 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.3□□□□□ -1.72
ABCD3P28288 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
ABCD3P28288 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
ABCD3P28288 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
ABCD3P28288 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ABCD3P28288 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ABCD3P28288 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.29□□□□□ -1.72
ABCD3P28288 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.29□□□□□ -1.72
ABCD3P28288 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
ABCD3P28288 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ABCD3P28288 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ABCD3P28288 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 ZNF137P-201ENST00000456718 1920 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.29□□□□□ -1.72
ABCD3P28288 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ABCD3P28288 OR14L1P-202ENST00000641545 3009 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ABCD3P28288 RN7SKP115-201ENST00000363177 317 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 RNU6-931P-201ENST00000363850 107 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 SNORA71.2-201ENST00000364941 134 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
ABCD3P28288 RNU6-761P-201ENST00000384148 107 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 RNU6-878P-201ENST00000384578 110 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 RPL23AP29-201ENST00000397284 453 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 AL592291.1-201ENST00000403830 352 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 YWHAZP7-201ENST00000436906 631 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.29□□□□□ -1.72
ABCD3P28288 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.29□□□□□ -1.72
ABCD3P28288 MTCYBP34-201ENST00000439552 670 ntBASIC4.29□□□□□ -1.72
ABCD3P28288 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.29□□□□□ -1.72
ABCD3P28288 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.29□□□□□ -1.72
ABCD3P28288 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms