Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 NDUFA3P4-201ENST00000560814 250 ntBASIC7.91□□□□□ -1.14
CD44P16070 MTND5P34-201ENST00000568888 325 ntBASIC7.91□□□□□ -1.14
CD44P16070 RN7SL664P-201ENST00000584239 305 ntBASIC7.91□□□□□ -1.14
CD44P16070 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 AL158032.1-201ENST00000605401 106 ntBASIC7.91□□□□□ -1.14
CD44P16070 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 AC107294.1-201ENST00000609524 467 ntBASIC7.91□□□□□ -1.14
CD44P16070 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 AC004825.2-201ENST00000616634 455 ntBASIC7.91□□□□□ -1.14
CD44P16070 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.91□□□□□ -1.14
CD44P16070 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.9□□□□□ -1.14
CD44P16070 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.9□□□□□ -1.14
CD44P16070 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.9□□□□□ -1.14
CD44P16070 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 Y_RNA.7-201ENST00000362352 102 ntBASIC7.9□□□□□ -1.14
CD44P16070 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 RNU6-45P-201ENST00000384471 107 ntBASIC7.9□□□□□ -1.14
CD44P16070 MIR190B-201ENST00000401119 79 ntBASIC7.9□□□□□ -1.14
CD44P16070 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 TMSB10P2-201ENST00000416049 131 ntBASIC7.9□□□□□ -1.14
CD44P16070 AC015977.1-201ENST00000418887 292 ntBASIC7.9□□□□□ -1.14
CD44P16070 GAPDHP57-201ENST00000424400 585 ntBASIC7.9□□□□□ -1.14
CD44P16070 PUDPP2-201ENST00000431423 643 ntBASIC7.9□□□□□ -1.14
CD44P16070 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.9□□□□□ -1.14
CD44P16070 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CD44P16070 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.9□□□□□ -1.14
CD44P16070 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.9□□□□□ -1.14
CD44P16070 CYCSP44-201ENST00000448560 313 ntBASIC7.9□□□□□ -1.14
CD44P16070 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.9□□□□□ -1.14
CD44P16070 AL034369.1-201ENST00000453808 477 ntBASIC7.9□□□□□ -1.14
CD44P16070 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.9□□□□□ -1.14
CD44P16070 RN7SL432P-201ENST00000484057 298 ntBASIC7.9□□□□□ -1.14
CD44P16070 RN7SL797P-201ENST00000486314 297 ntBASIC7.9□□□□□ -1.14
CD44P16070 RPS4XP23-201ENST00000487801 237 ntBASIC7.9□□□□□ -1.14
CD44P16070 AC097263.1-201ENST00000496795 606 ntBASIC7.9□□□□□ -1.14
CD44P16070 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.9□□□□□ -1.14
CD44P16070 CHCHD2P7-201ENST00000508008 452 ntBASIC7.9□□□□□ -1.14
CD44P16070 LINC01085-203ENST00000511195 326 ntBASIC7.9□□□□□ -1.14
CD44P16070 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC7.9□□□□□ -1.14
CD44P16070 ERHP1-201ENST00000523006 310 ntBASIC7.9□□□□□ -1.14
CD44P16070 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.9□□□□□ -1.14
CD44P16070 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.9□□□□□ -1.14
CD44P16070 HSPE1P14-201ENST00000605812 302 ntBASIC7.9□□□□□ -1.14
CD44P16070 AC000123.2-201ENST00000623124 461 ntBASIC7.9□□□□□ -1.14
CD44P16070 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.9□□□□□ -1.14
CD44P16070 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CD44P16070 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.9□□□□□ -1.14
CD44P16070 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CD44P16070 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CD44P16070 AC068870.1-201ENST00000563737 2455 ntBASIC7.9□□□□□ -1.15
CD44P16070 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CD44P16070 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CD44P16070 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CD44P16070 AC110491.1-201ENST00000562191 2010 ntBASIC7.9□□□□□ -1.15
CD44P16070 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CD44P16070 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.9□□□□□ -1.15
CD44P16070 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CD44P16070 U3.1-201ENST00000362500 215 ntBASIC7.89□□□□□ -1.15
CD44P16070 RNA5SP472-201ENST00000363868 119 ntBASIC7.89□□□□□ -1.15
CD44P16070 Y_RNA.238-201ENST00000364441 102 ntBASIC7.89□□□□□ -1.15
CD44P16070 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CD44P16070 SMIM11P1-201ENST00000369586 178 ntBASIC7.89□□□□□ -1.15
CD44P16070 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.89□□□□□ -1.15
CD44P16070 RN7SKP62-201ENST00000384539 329 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC008171.1-201ENST00000395058 200 ntBASIC7.89□□□□□ -1.15
CD44P16070 RPL12P23-201ENST00000405880 490 ntBASIC7.89□□□□□ -1.15
CD44P16070 AL121916.1-201ENST00000429405 308 ntBASIC7.89□□□□□ -1.15
CD44P16070 PHB2P1-201ENST00000434943 890 ntBASIC7.89□□□□□ -1.15
CD44P16070 AL451136.1-201ENST00000435399 325 ntBASIC7.89□□□□□ -1.15
CD44P16070 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.89□□□□□ -1.15
CD44P16070 RPS11P1-201ENST00000451072 473 ntBASIC7.89□□□□□ -1.15
CD44P16070 AL034399.1-201ENST00000451535 380 ntBASIC7.89□□□□□ -1.15
CD44P16070 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC7.89□□□□□ -1.15
CD44P16070 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.89□□□□□ -1.15
CD44P16070 RPL7P17-201ENST00000470927 724 ntBASIC7.89□□□□□ -1.15
CD44P16070 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms