Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NID1P14543 TOMM20P1-201ENST00000534518 427 ntBASIC5.79□□□□□ -1.48
NID1P14543 OR8R1P-201ENST00000543943 764 ntBASIC5.79□□□□□ -1.48
NID1P14543 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.79□□□□□ -1.48
NID1P14543 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.79□□□□□ -1.48
NID1P14543 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.79□□□□□ -1.48
NID1P14543 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.79□□□□□ -1.48
NID1P14543 AC018552.3-201ENST00000567416 561 ntBASIC5.79□□□□□ -1.48
NID1P14543 OR1E3-201ENST00000575608 948 ntBASIC5.79□□□□□ -1.48
NID1P14543 AL121992.2-201ENST00000606262 256 ntBASIC5.79□□□□□ -1.48
NID1P14543 AC098479.1-201ENST00000609225 154 ntBASIC5.79□□□□□ -1.48
NID1P14543 uc_338.34-201ENST00000617467 174 ntBASIC5.79□□□□□ -1.48
NID1P14543 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.79□□□□□ -1.48
NID1P14543 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.79□□□□□ -1.48
NID1P14543 CDRT1-208ENST00000630868 794 ntBASIC5.79□□□□□ -1.48
NID1P14543 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.79□□□□□ -1.48
NID1P14543 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.79□□□□□ -1.48
NID1P14543 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NID1P14543 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.79□□□□□ -1.48
NID1P14543 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.79□□□□□ -1.48
NID1P14543 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NID1P14543 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NID1P14543 KPNA2P1-201ENST00000458289 1591 ntBASIC5.79□□□□□ -1.48
NID1P14543 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.79□□□□□ -1.48
NID1P14543 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NID1P14543 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.79□□□□□ -1.48
NID1P14543 AP000547.3-204ENST00000588548 2523 ntBASIC5.79□□□□□ -1.48
NID1P14543 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.79□□□□□ -1.48
NID1P14543 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NID1P14543 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 AC068769.1-201ENST00000474767 2426 ntBASIC5.78□□□□□ -1.48
NID1P14543 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 SAMMSON-210ENST00000641260 1308 ntBASIC5.78□□□□□ -1.48
NID1P14543 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 AC005592.1-201ENST00000566527 1640 ntBASIC5.78□□□□□ -1.48
NID1P14543 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 AC003973.3-201ENST00000624863 2822 ntBASIC5.78□□□□□ -1.48
NID1P14543 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 Y_RNA.167-201ENST00000363735 109 ntBASIC5.78□□□□□ -1.48
NID1P14543 SNORA62.1-201ENST00000364287 154 ntBASIC5.78□□□□□ -1.48
NID1P14543 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 Y_RNA.396-201ENST00000383949 103 ntBASIC5.78□□□□□ -1.48
NID1P14543 Y_RNA.512-201ENST00000384518 102 ntBASIC5.78□□□□□ -1.48
NID1P14543 Y_RNA.645-201ENST00000391229 102 ntBASIC5.78□□□□□ -1.48
NID1P14543 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.78□□□□□ -1.48
NID1P14543 AL359976.1-201ENST00000418655 3528 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC012065.2-201ENST00000421295 375 ntBASIC5.78□□□□□ -1.48
NID1P14543 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NID1P14543 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.78□□□□□ -1.48
NID1P14543 RPS24P8-201ENST00000431490 402 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC010881.1-201ENST00000433830 235 ntBASIC5.78□□□□□ -1.48
NID1P14543 AL161722.2-201ENST00000434731 981 ntBASIC5.78□□□□□ -1.48
NID1P14543 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 AL035551.1-201ENST00000446931 348 ntBASIC5.78□□□□□ -1.48
NID1P14543 HMGN3P1-201ENST00000453847 193 ntBASIC5.78□□□□□ -1.48
NID1P14543 AL133351.3-201ENST00000454998 193 ntBASIC5.78□□□□□ -1.48
NID1P14543 RANP2-201ENST00000456833 229 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.78□□□□□ -1.48
NID1P14543 AL049714.1-201ENST00000466686 347 ntBASIC5.78□□□□□ -1.48
NID1P14543 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.78□□□□□ -1.48
NID1P14543 RPL7P43-201ENST00000478876 753 ntBASIC5.78□□□□□ -1.48
NID1P14543 RPL23AP72-201ENST00000492447 435 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.78□□□□□ -1.48
NID1P14543 AC113367.2-201ENST00000505749 160 ntBASIC5.78□□□□□ -1.48
NID1P14543 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 MTND4P7-201ENST00000523876 130 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.78□□□□□ -1.48
NID1P14543 GNAI2P1-201ENST00000541815 315 ntBASIC5.78□□□□□ -1.48
NID1P14543 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 AC128657.1-201ENST00000549459 145 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.78□□□□□ -1.48
NID1P14543 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.78□□□□□ -1.48
NID1P14543 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.78□□□□□ -1.48
NID1P14543 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.78□□□□□ -1.48
NID1P14543 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.78□□□□□ -1.48
NID1P14543 AC027229.1-201ENST00000583887 253 ntBASIC5.78□□□□□ -1.48
NID1P14543 MIR3672-201ENST00000584290 82 ntBASIC5.78□□□□□ -1.48
NID1P14543 SNORD39.3-201ENST00000584451 71 ntBASIC5.78□□□□□ -1.48
NID1P14543 AC017100.2-201ENST00000584628 355 ntBASIC5.78□□□□□ -1.48
NID1P14543 AL353997.4-201ENST00000586196 166 ntBASIC5.78□□□□□ -1.48
NID1P14543 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NID1P14543 AC111152.1-202ENST00000635848 339 ntBASIC5.78□□□□□ -1.48
NID1P14543 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.78□□□□□ -1.48
NID1P14543 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NID1P14543 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NID1P14543 AP001541.1-201ENST00000623322 1904 ntBASIC5.78□□□□□ -1.48
NID1P14543 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms