Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL11A1P12107 TTC39DP-201ENST00000416781 1688 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL11A1P12107 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL11A1P12107 BX679664.1-201ENST00000434429 253 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 CST9LP2-201ENST00000437612 320 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.58□□□□□ -1.84
COL11A1P12107 ARL2BPP6-201ENST00000512757 439 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 RN7SKP132-201ENST00000516001 208 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.58□□□□□ -1.84
COL11A1P12107 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.58□□□□□ -1.84
COL11A1P12107 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.58□□□□□ -1.84
COL11A1P12107 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.58□□□□□ -1.84
COL11A1P12107 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.58□□□□□ -1.84
COL11A1P12107 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.58□□□□□ -1.84
COL11A1P12107 IGHV3-29-201ENST00000604817 344 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL11A1P12107 MTCO1P22-201ENST00000604619 1360 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL11A1P12107 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.58□□□□□ -1.84
COL11A1P12107 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL11A1P12107 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
COL11A1P12107 RNA5SP31-201ENST00000411144 127 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 ISCA1P2-201ENST00000438679 421 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 RPS6P2-201ENST00000454208 705 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.58□□□□□ -1.84
COL11A1P12107 RPS27AP1-201ENST00000475545 471 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.58□□□□□ -1.84
COL11A1P12107 AC113192.3-201ENST00000529152 742 ntBASIC3.58□□□□□ -1.84
COL11A1P12107 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.58□□□□□ -1.84
COL11A1P12107 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.58□□□□□ -1.84
COL11A1P12107 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
COL11A1P12107 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL11A1P12107 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL11A1P12107 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
COL11A1P12107 AL451142.2-201ENST00000429076 2090 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL11A1P12107 MIR422A-201ENST00000362286 90 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 AL603766.1-201ENST00000407763 664 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 RAC1P3-201ENST00000416129 580 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.57□□□□□ -1.84
COL11A1P12107 HIGD1AP3-201ENST00000515857 278 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 MIR2114-201ENST00000516645 80 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 AC027309.2-201ENST00000520566 192 ntBASIC3.57□□□□□ -1.84
COL11A1P12107 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
COL11A1P12107 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.57□□□□□ -1.84
COL11A1P12107 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.57□□□□□ -1.84
COL11A1P12107 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.57□□□□□ -1.84
COL11A1P12107 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL11A1P12107 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL11A1P12107 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL11A1P12107 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL11A1P12107 RNU6-249P-201ENST00000363016 102 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 RNU6-55P-201ENST00000411092 107 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.56□□□□□ -1.84
COL11A1P12107 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.56□□□□□ -1.84
COL11A1P12107 FGF7P3-201ENST00000454645 303 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 SEPT7P3-201ENST00000455017 621 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.56□□□□□ -1.84
COL11A1P12107 RNA5SP217-201ENST00000515959 91 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL11A1P12107 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.56□□□□□ -1.84
COL11A1P12107 AL034351.1-201ENST00000605288 668 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
COL11A1P12107 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL11A1P12107 OR5H2-201ENST00000355273 945 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL11A1P12107 AL592148.1-201ENST00000413568 445 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.56□□□□□ -1.84
COL11A1P12107 OR6K4P-201ENST00000423179 955 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.56□□□□□ -1.84
COL11A1P12107 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.56□□□□□ -1.84
COL11A1P12107 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.56□□□□□ -1.84
COL11A1P12107 AC010653.1-201ENST00000571108 881 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.56□□□□□ -1.84
COL11A1P12107 AL365400.2-201ENST00000605604 902 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 MIR7106-201ENST00000612419 65 ntBASIC3.56□□□□□ -1.84
COL11A1P12107 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.56□□□□□ -1.84
COL11A1P12107 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.56□□□□□ -1.84
COL11A1P12107 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.55□□□□□ -1.84
COL11A1P12107 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.55□□□□□ -1.84
COL11A1P12107 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A1P12107 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A1P12107 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
COL11A1P12107 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.55□□□□□ -1.84
COL11A1P12107 RPS24P13-201ENST00000442520 397 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
COL11A1P12107 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.55□□□□□ -1.84
COL11A1P12107 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
COL11A1P12107 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.55□□□□□ -1.84
COL11A1P12107 GTF3AP2-201ENST00000557014 266 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.55□□□□□ -1.84
COL11A1P12107 AC018552.3-201ENST00000567416 561 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 AC008507.1-201ENST00000587506 734 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 AC025946.2-201ENST00000603398 234 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL11A1P12107 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms