Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RB1P06400 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RB1P06400 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 AC000367.1-201ENST00000452711 1766 ntBASIC4.48□□□□□ -1.69
RB1P06400 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RB1P06400 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 SNORA63.1-201ENST00000362493 131 ntBASIC4.48□□□□□ -1.69
RB1P06400 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.48□□□□□ -1.69
RB1P06400 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 RAC1P8-201ENST00000427086 527 ntBASIC4.48□□□□□ -1.69
RB1P06400 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 AL513175.1-201ENST00000431492 780 ntBASIC4.48□□□□□ -1.69
RB1P06400 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 RPL7P59-201ENST00000447700 943 ntBASIC4.48□□□□□ -1.69
RB1P06400 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 AL009048.1-201ENST00000450437 298 ntBASIC4.48□□□□□ -1.69
RB1P06400 NDUFS5P3-201ENST00000450668 321 ntBASIC4.48□□□□□ -1.69
RB1P06400 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 S100A11P1-201ENST00000477525 312 ntBASIC4.48□□□□□ -1.69
RB1P06400 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 AC110792.1-201ENST00000491826 472 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC048346.1-201ENST00000510247 144 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC005351.1-201ENST00000511152 786 ntBASIC4.48□□□□□ -1.69
RB1P06400 SOD1P3-201ENST00000518682 454 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 AP001207.1-201ENST00000524051 481 ntBASIC4.48□□□□□ -1.69
RB1P06400 OR10V3P-201ENST00000525712 725 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC006064.5-201ENST00000541782 248 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC092747.2-201ENST00000545069 983 ntBASIC4.48□□□□□ -1.69
RB1P06400 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 EIF5A2P1-201ENST00000564027 460 ntBASIC4.48□□□□□ -1.69
RB1P06400 RPL23AP97-201ENST00000568955 471 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 MIR4458-201ENST00000578872 75 ntBASIC4.48□□□□□ -1.69
RB1P06400 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 RPP40P2-201ENST00000603596 712 ntBASIC4.48□□□□□ -1.69
RB1P06400 AL445435.1-201ENST00000604232 665 ntBASIC4.48□□□□□ -1.69
RB1P06400 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 AC009237.15-201ENST00000610252 501 ntBASIC4.48□□□□□ -1.69
RB1P06400 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 AC010975.3-201ENST00000618727 978 ntBASIC4.48□□□□□ -1.69
RB1P06400 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RB1P06400 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 AC124312.6-202ENST00000623624 418 ntBASIC4.48□□□□□ -1.69
RB1P06400 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RB1P06400 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.48□□□□□ -1.69
RB1P06400 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.48□□□□□ -1.69
RB1P06400 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RB1P06400 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.48□□□□□ -1.69
RB1P06400 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
RB1P06400 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.47□□□□□ -1.69
RB1P06400 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RB1P06400 DSTNP4-201ENST00000399472 474 ntBASIC4.47□□□□□ -1.69
RB1P06400 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.47□□□□□ -1.69
RB1P06400 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.47□□□□□ -1.69
RB1P06400 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 YME1L1P1-201ENST00000429435 297 ntBASIC4.47□□□□□ -1.69
RB1P06400 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.47□□□□□ -1.69
RB1P06400 AC010881.1-201ENST00000433830 235 ntBASIC4.47□□□□□ -1.69
RB1P06400 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.47□□□□□ -1.69
RB1P06400 ARL4AP3-201ENST00000441452 574 ntBASIC4.47□□□□□ -1.69
RB1P06400 OR10R1P-201ENST00000441524 1141 ntBASIC4.47□□□□□ -1.69
RB1P06400 HMGB3P6-201ENST00000444896 598 ntBASIC4.47□□□□□ -1.69
RB1P06400 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RB1P06400 PRSS3P4-201ENST00000453323 162 ntBASIC4.47□□□□□ -1.69
RB1P06400 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.47□□□□□ -1.69
RB1P06400 AC108022.1-201ENST00000493466 478 ntBASIC4.47□□□□□ -1.69
RB1P06400 HMGB1P21-201ENST00000502313 581 ntBASIC4.47□□□□□ -1.69
RB1P06400 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.47□□□□□ -1.69
RB1P06400 AC109471.1-201ENST00000511631 612 ntBASIC4.47□□□□□ -1.69
RB1P06400 TRMT10BP1-201ENST00000519377 943 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms