Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR1193-201ENST00000408109 78 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RNU2-16P-201ENST00000410712 136 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 TPMTP3-201ENST00000411928 735 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RPS20P14-201ENST00000412545 360 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL139095.3-201ENST00000419672 1203 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL358176.3-201ENST00000420757 454 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC062016.2-201ENST00000420950 676 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RPL23AP38-201ENST00000423801 469 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RPL7P44-201ENST00000424827 742 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 VDAC1P6-201ENST00000430062 855 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RPL23AP52-201ENST00000439311 478 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 UBE2V1P3-201ENST00000439651 417 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RPS26P2-201ENST00000440331 348 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 ARAFP2-201ENST00000440565 559 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC009263.1-201ENST00000441193 1239 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 TPMTP4-201ENST00000450749 678 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 OR6C5P-201ENST00000452388 923 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 RN7SL41P-201ENST00000476144 297 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC041039.1-201ENST00000485656 536 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 ARL4AP1-201ENST00000503220 705 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 WBP1LP4-201ENST00000505043 344 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 HNRNPKP5-201ENST00000515300 253 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 SNORA70.11-201ENST00000515987 138 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 SNORA70.13-201ENST00000516116 138 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AP002963.1-201ENST00000530590 184 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AP002812.4-201ENST00000532139 286 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 TRAV8-5-201ENST00000537369 341 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AGGF1P8-201ENST00000562979 1000 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC007224.1-201ENST00000564410 144 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 MIR3160-1-201ENST00000577972 85 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 RN7SL176P-201ENST00000580352 264 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 BNIP3P30-201ENST00000601184 574 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC090181.2-201ENST00000602975 672 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL136363.2-201ENST00000604173 851 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC128687.1-201ENST00000605304 619 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC090186.1-201ENST00000605991 572 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL031775.1-201ENST00000607014 887 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC010678.1-201ENST00000614118 713 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AC234782.5-201ENST00000617723 324 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL023881.1-201ENST00000621088 301 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 AL731532.2-201ENST00000623542 1953 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AL158163.1-201ENST00000603915 1649 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 RNU6-1339P-201ENST00000363574 91 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 RNU6-931P-201ENST00000363850 107 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 SNORA62.2-201ENST00000364672 152 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AL161449.1-201ENST00000414531 1199 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC007435.1-201ENST00000421086 415 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 DPRXP1-201ENST00000426312 460 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 MTATP6P13-201ENST00000438531 667 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 MTATP6P23-201ENST00000440153 476 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 USP9YP29-201ENST00000445112 563 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC114755.5-201ENST00000447760 831 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 ZNF114P1-201ENST00000453500 292 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 RPL35P6-201ENST00000490024 372 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC111193.1-201ENST00000504097 155 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC109458.1-201ENST00000508858 316 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 ATP1B1P1-201ENST00000509767 915 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 MIR2116-201ENST00000517221 80 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC106038.2-201ENST00000520706 568 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOAP06340 MTCYBP41-201ENST00000528913 1123 ntBASIC5.2□□□□□ -1.58
HLA-DOAP06340 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms