Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR184-201ENST00000384962 84 ntBASIC3.66□□□□□ -1.82
APOEP02649 RN7SKP53-201ENST00000411337 315 ntBASIC3.66□□□□□ -1.82
APOEP02649 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 DBIP2-201ENST00000419076 262 ntBASIC3.66□□□□□ -1.82
APOEP02649 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 AC009965.2-201ENST00000425328 970 ntBASIC3.66□□□□□ -1.82
APOEP02649 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 AL035458.1-201ENST00000433096 585 ntBASIC3.66□□□□□ -1.82
APOEP02649 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 RN7SL594P-201ENST00000470590 287 ntBASIC3.66□□□□□ -1.82
APOEP02649 AP002884.2-201ENST00000471647 395 ntBASIC3.66□□□□□ -1.82
APOEP02649 AC084357.1-201ENST00000473404 255 ntBASIC3.66□□□□□ -1.82
APOEP02649 AC092451.1-201ENST00000480211 153 ntBASIC3.66□□□□□ -1.82
APOEP02649 ARL2BPP6-201ENST00000512757 439 ntBASIC3.66□□□□□ -1.82
APOEP02649 PHBP14-201ENST00000512887 367 ntBASIC3.66□□□□□ -1.82
APOEP02649 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.66□□□□□ -1.82
APOEP02649 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 AP006245.1-201ENST00000522549 120 ntBASIC3.66□□□□□ -1.82
APOEP02649 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.66□□□□□ -1.82
APOEP02649 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
APOEP02649 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.66□□□□□ -1.82
APOEP02649 uc_338.9-201ENST00000617424 182 ntBASIC3.66□□□□□ -1.82
APOEP02649 AC244258.1-201ENST00000637553 1071 ntBASIC3.66□□□□□ -1.82
APOEP02649 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 NMD3P1-201ENST00000439704 1488 ntBASIC3.66□□□□□ -1.82
APOEP02649 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOEP02649 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
APOEP02649 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
APOEP02649 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
APOEP02649 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
APOEP02649 FRG1CP-201ENST00000358464 769 ntBASIC3.65□□□□□ -1.83
APOEP02649 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
APOEP02649 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
APOEP02649 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.65□□□□□ -1.83
APOEP02649 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.65□□□□□ -1.83
APOEP02649 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.65□□□□□ -1.83
APOEP02649 CRYBB2P1-203ENST00000415709 538 ntBASIC3.65□□□□□ -1.83
APOEP02649 RPL30P3-201ENST00000424262 333 ntBASIC3.65□□□□□ -1.83
APOEP02649 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
APOEP02649 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.65□□□□□ -1.83
APOEP02649 AL606490.8-201ENST00000441624 319 ntBASIC3.65□□□□□ -1.83
APOEP02649 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
APOEP02649 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.65□□□□□ -1.83
APOEP02649 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.65□□□□□ -1.83
APOEP02649 TRBV8-2-201ENST00000475637 270 ntBASIC3.65□□□□□ -1.83
APOEP02649 AC012170.1-201ENST00000495139 359 ntBASIC3.65□□□□□ -1.83
APOEP02649 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.65□□□□□ -1.83
APOEP02649 DUXAP2-201ENST00000519198 589 ntBASIC3.65□□□□□ -1.83
APOEP02649 IGHV3-76-201ENST00000522465 295 ntBASIC3.65□□□□□ -1.83
APOEP02649 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
APOEP02649 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.65□□□□□ -1.83
APOEP02649 AL161713.1-201ENST00000555538 145 ntBASIC3.65□□□□□ -1.83
APOEP02649 MIR4444-1-201ENST00000581696 74 ntBASIC3.65□□□□□ -1.83
APOEP02649 MIR4444-2-201ENST00000584390 74 ntBASIC3.65□□□□□ -1.83
APOEP02649 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.65□□□□□ -1.83
APOEP02649 AC007423.1-201ENST00000605009 627 ntBASIC3.65□□□□□ -1.83
APOEP02649 AC099778.2-201ENST00000610904 211 ntBASIC3.65□□□□□ -1.83
APOEP02649 AL357559.1-201ENST00000622228 274 ntBASIC3.65□□□□□ -1.83
APOEP02649 AL392088.2-201ENST00000637607 285 ntBASIC3.65□□□□□ -1.83
APOEP02649 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOEP02649 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
APOEP02649 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOEP02649 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOEP02649 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
APOEP02649 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.64□□□□□ -1.83
APOEP02649 AC068647.1-201ENST00000489539 2265 ntBASIC3.64□□□□□ -1.83
APOEP02649 MFSD8-233ENST00000641482 4860 ntBASIC3.64□□□□□ -1.83
APOEP02649 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOEP02649 MIR7-3-201ENST00000384898 110 ntBASIC3.64□□□□□ -1.83
APOEP02649 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.64□□□□□ -1.83
APOEP02649 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.64□□□□□ -1.83
APOEP02649 MTND4P22-201ENST00000413116 1169 ntBASIC3.64□□□□□ -1.83
APOEP02649 AC245052.5-201ENST00000416320 649 ntBASIC3.64□□□□□ -1.83
APOEP02649 BX842559.1-201ENST00000419615 532 ntBASIC3.64□□□□□ -1.83
APOEP02649 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.64□□□□□ -1.83
APOEP02649 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.64□□□□□ -1.83
APOEP02649 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.64□□□□□ -1.83
APOEP02649 AL389915.1-201ENST00000422463 466 ntBASIC3.64□□□□□ -1.83
APOEP02649 CCRL1P1-201ENST00000449542 1053 ntBASIC3.64□□□□□ -1.83
APOEP02649 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.64□□□□□ -1.83
APOEP02649 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
APOEP02649 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOEP02649 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.64□□□□□ -1.83
APOEP02649 AL139174.1-201ENST00000531489 886 ntBASIC3.64□□□□□ -1.83
APOEP02649 OR5D17P-201ENST00000531492 978 ntBASIC3.64□□□□□ -1.83
APOEP02649 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
APOEP02649 UBE2NP1-201ENST00000545592 458 ntBASIC3.64□□□□□ -1.83
APOEP02649 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
APOEP02649 ZNF192P1-203ENST00000565888 810 ntBASIC3.64□□□□□ -1.83
APOEP02649 MIR3922-201ENST00000585192 84 ntBASIC3.64□□□□□ -1.83
APOEP02649 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.64□□□□□ -1.83
APOEP02649 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.64□□□□□ -1.83
APOEP02649 RMST_8.1-201ENST00000610287 165 ntBASIC3.64□□□□□ -1.83
APOEP02649 AL392048.1-201ENST00000613946 534 ntBASIC3.64□□□□□ -1.83
APOEP02649 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.64□□□□□ -1.83
APOEP02649 AC092159.4-201ENST00000624944 550 ntBASIC3.64□□□□□ -1.83
APOEP02649 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.64□□□□□ -1.83
APOEP02649 AC119744.1-201ENST00000454746 1715 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms