Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SRP72P2-201ENST00000344851 1979 ntBASIC3.78□□□□□ -1.8
CTDNEP1O95476 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
CTDNEP1O95476 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CTDNEP1O95476 SNORA71.3-201ENST00000362582 128 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 RNU1-87P-201ENST00000363727 170 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC069157.1-201ENST00000421749 137 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC005300.1-201ENST00000428401 373 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CTDNEP1O95476 Z75741.1-201ENST00000446793 314 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC115115.1-201ENST00000449927 248 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 RPL21P71-201ENST00000465598 459 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CTDNEP1O95476 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 APOOP4-201ENST00000513530 597 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 SNORA64.4-201ENST00000516632 81 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 CBX3P5-201ENST00000552017 521 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 MIR4716-201ENST00000579628 84 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AP000919.1-202ENST00000581139 1264 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AL354976.1-201ENST00000613843 387 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 AL136964.1-201ENST00000622038 2990 ntBASIC3.77□□□□□ -1.81
CTDNEP1O95476 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.77□□□□□ -1.81
CTDNEP1O95476 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTDNEP1O95476 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 XIAPP3-201ENST00000312918 795 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 MIR200C-201ENST00000384980 68 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 MT-TP-201ENST00000387461 68 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AL034403.1-201ENST00000399414 885 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC092017.2-201ENST00000427600 362 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 Z99127.3-201ENST00000448158 395 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 CALM1P2-201ENST00000452941 448 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC010468.1-201ENST00000461022 817 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC091153.1-201ENST00000466297 402 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 METTL15P1-201ENST00000481421 1045 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC092045.1-201ENST00000495716 1231 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC087888.1-201ENST00000550884 1254 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AL391261.4-201ENST00000616012 481 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 AC034229.5-201ENST00000624258 185 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTDNEP1O95476 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CTDNEP1O95476 PWAR6-201ENST00000552334 4618 ntBASIC3.76□□□□□ -1.81
CTDNEP1O95476 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTDNEP1O95476 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTDNEP1O95476 Z83843.1-201ENST00000604070 3685 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 DHFRP5-201ENST00000406944 564 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 RNU2-65P-201ENST00000410162 185 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 RNA5SP293-201ENST00000410527 113 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC006960.1-201ENST00000419980 153 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC005019.1-201ENST00000436455 431 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 RPL23AP22-201ENST00000437556 453 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 RSL24D1P2-201ENST00000445584 366 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC069540.1-201ENST00000446320 988 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 LARP7P4-201ENST00000481075 878 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.75□□□□□ -1.81
CTDNEP1O95476 VN1R79P-201ENST00000593540 513 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 AC009318.3-201ENST00000616916 503 ntBASIC3.75□□□□□ -1.81
CTDNEP1O95476 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTDNEP1O95476 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTDNEP1O95476 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CTDNEP1O95476 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTDNEP1O95476 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTDNEP1O95476 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CTDNEP1O95476 RNU4-23P-201ENST00000362839 140 ntBASIC3.74□□□□□ -1.81
CTDNEP1O95476 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms