Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 CYCSP2-201ENST00000558168 301 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC027807.1-201ENST00000559921 996 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS4BO75351 PSMA6P4-201ENST00000603247 718 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 RNF138P2-201ENST00000603490 592 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC239868.4-201ENST00000608318 671 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AP001521.1-201ENST00000609150 300 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC005332.10-201ENST00000612725 619 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AL356266.1-201ENST00000623311 483 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 ZNF37BP-203ENST00000452306 1352 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 CYP1D1P-201ENST00000416662 1433 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AC139713.2-215ENST00000641428 5037 ntBASIC4.85□□□□□ -1.63
VPS4BO75351 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS4BO75351 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS4BO75351 AC010300.1-201ENST00000600671 5134 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 USP9YP4-201ENST00000424401 1745 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 SNRPEP3-201ENST00000338402 276 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 RNU6-1122P-201ENST00000384449 107 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS4BO75351 RPS7P13-201ENST00000413955 498 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 CKS1BP6-201ENST00000424932 240 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 NPM1P24-201ENST00000428039 894 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 C8orf59P1-201ENST00000429930 303 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 TMX2P1-201ENST00000436507 708 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 ELOCP10-201ENST00000440624 327 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 EPS15P1-201ENST00000448836 336 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 AL445433.1-201ENST00000457507 257 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 RPS17P2-201ENST00000461663 408 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS4BO75351 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 AF213884.2-201ENST00000510417 903 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS4BO75351 AC239860.2-201ENST00000525886 270 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS4BO75351 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS4BO75351 GTF2IP22-201ENST00000554443 182 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS4BO75351 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 AL020997.2-201ENST00000602607 184 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC107304.1-201ENST00000604229 296 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 ELOCP34-201ENST00000604436 327 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC068276.1-201ENST00000605793 379 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 RNU6-88P-201ENST00000606801 100 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AL356121.2-201ENST00000624715 780 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC079228.1-201ENST00000624774 1049 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 AC025048.6-202ENST00000627667 438 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 AL445437.1-201ENST00000623157 3087 ntBASIC4.84□□□□□ -1.63
VPS4BO75351 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS4BO75351 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
VPS4BO75351 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS4BO75351 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
VPS4BO75351 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.84□□□□□ -1.64
VPS4BO75351 AC107027.3-201ENST00000565095 3473 ntBASIC4.84□□□□□ -1.64
VPS4BO75351 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS4BO75351 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS4BO75351 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS4BO75351 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 AL034370.1-201ENST00000397254 1590 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 CR383658.2-201ENST00000547576 1525 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 AC135352.1-201ENST00000506173 1418 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS4BO75351 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VPS4BO75351 RNU6-462P-201ENST00000362659 105 ntBASIC4.83□□□□□ -1.64
VPS4BO75351 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS4BO75351 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms