Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN1O60741 SNORD6-201ENST00000365444 73 ntBASIC3.64□□□□□ -1.83
HCN1O60741 HNRNPDP2-201ENST00000406475 478 ntBASIC3.64□□□□□ -1.83
HCN1O60741 RN7SKP159-201ENST00000410657 292 ntBASIC3.64□□□□□ -1.83
HCN1O60741 RPL7AP73-201ENST00000413490 353 ntBASIC3.64□□□□□ -1.83
HCN1O60741 BMS1P19-201ENST00000433925 393 ntBASIC3.64□□□□□ -1.83
HCN1O60741 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCN1O60741 HMGN2P21-201ENST00000447764 270 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AL500522.2-201ENST00000448562 343 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.64□□□□□ -1.83
HCN1O60741 MTCO3P16-201ENST00000454456 754 ntBASIC3.64□□□□□ -1.83
HCN1O60741 RPL37P6-202ENST00000464216 403 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC078857.1-201ENST00000469870 667 ntBASIC3.64□□□□□ -1.83
HCN1O60741 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN1O60741 TRAV31-201ENST00000502780 342 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC008628.1-201ENST00000508663 265 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC021146.1-201ENST00000511202 716 ntBASIC3.64□□□□□ -1.83
HCN1O60741 PTGES3P3-201ENST00000511479 482 ntBASIC3.64□□□□□ -1.83
HCN1O60741 USP9YP5-201ENST00000511770 630 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC023141.12-201ENST00000512399 199 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.64□□□□□ -1.83
HCN1O60741 AP004242.1-201ENST00000533701 349 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.64□□□□□ -1.83
HCN1O60741 AGGF1P8-201ENST00000562979 1000 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AL133457.1-201ENST00000564251 987 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC106734.1-201ENST00000568646 663 ntBASIC3.64□□□□□ -1.83
HCN1O60741 RN7SL703P-201ENST00000578485 302 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AP000919.1-202ENST00000581139 1264 ntBASIC3.64□□□□□ -1.83
HCN1O60741 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
HCN1O60741 AC006130.2-201ENST00000586202 326 ntBASIC3.64□□□□□ -1.83
HCN1O60741 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN1O60741 AL392112.1-201ENST00000605115 829 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC112503.1-201ENST00000608436 391 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AC012531.5-201ENST00000611375 151 ntBASIC3.64□□□□□ -1.83
HCN1O60741 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN1O60741 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
HCN1O60741 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
HCN1O60741 MFSD8-213ENST00000641134 1327 ntBASIC3.64□□□□□ -1.83
HCN1O60741 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN1O60741 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN1O60741 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.63□□□□□ -1.83
HCN1O60741 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 ASNSP1-204ENST00000641977 1664 ntBASIC3.63□□□□□ -1.83
HCN1O60741 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCN1O60741 SNORA70E-201ENST00000384492 135 ntBASIC3.63□□□□□ -1.83
HCN1O60741 MIR554-201ENST00000384874 96 ntBASIC3.63□□□□□ -1.83
HCN1O60741 SNORA48.7-201ENST00000391302 135 ntBASIC3.63□□□□□ -1.83
HCN1O60741 HMGB3P19-201ENST00000403971 560 ntBASIC3.63□□□□□ -1.83
HCN1O60741 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN1O60741 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN1O60741 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 AC068135.1-201ENST00000446164 246 ntBASIC3.63□□□□□ -1.83
HCN1O60741 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN1O60741 CYCSP20-201ENST00000473154 315 ntBASIC3.63□□□□□ -1.83
HCN1O60741 NIPA2P2-201ENST00000496376 1083 ntBASIC3.63□□□□□ -1.83
HCN1O60741 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.63□□□□□ -1.83
HCN1O60741 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.63□□□□□ -1.83
HCN1O60741 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN1O60741 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.63□□□□□ -1.83
HCN1O60741 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN1O60741 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 CENPUP2-201ENST00000555897 1186 ntBASIC3.63□□□□□ -1.83
HCN1O60741 AC034105.4-201ENST00000568304 277 ntBASIC3.63□□□□□ -1.83
HCN1O60741 MIR5685-201ENST00000579080 79 ntBASIC3.63□□□□□ -1.83
HCN1O60741 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 RPL21P136-201ENST00000605378 396 ntBASIC3.63□□□□□ -1.83
HCN1O60741 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.63□□□□□ -1.83
HCN1O60741 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN1O60741 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HCN1O60741 GABPAP-201ENST00000419271 1356 ntBASIC3.63□□□□□ -1.83
HCN1O60741 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HCN1O60741 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN1O60741 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN1O60741 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN1O60741 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HCN1O60741 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 MIR16-2-201ENST00000362117 81 ntBASIC3.62□□□□□ -1.83
HCN1O60741 RNA5SP27-201ENST00000363839 119 ntBASIC3.62□□□□□ -1.83
HCN1O60741 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 RNU6-213P-201ENST00000384051 104 ntBASIC3.62□□□□□ -1.83
HCN1O60741 RNU6-481P-201ENST00000384194 107 ntBASIC3.62□□□□□ -1.83
HCN1O60741 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN1O60741 UBE2V1P11-201ENST00000411559 285 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms