Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN3O15551 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN3O15551 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN3O15551 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN3O15551 RNA5SP27-201ENST00000363839 119 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN3O15551 RNU6-796P-201ENST00000391086 107 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 PTMAP2-201ENST00000397627 327 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 PRRC2CP1-201ENST00000404428 159 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC092745.2-202ENST00000411880 369 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 RAB9AP3-201ENST00000412737 573 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN3O15551 Z95327.1-201ENST00000446082 482 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 RAB9AP1-201ENST00000449393 573 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 MRPL35P4-201ENST00000453682 566 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 DNAJC19P1-201ENST00000455312 319 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 RPL7P15-201ENST00000461190 712 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC022034.3-201ENST00000471393 478 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC010468.3-201ENST00000508225 458 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.06□□□□□ -1.76
CLDN3O15551 RN7SKP96-201ENST00000516948 297 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN3O15551 NARSP2-201ENST00000518524 679 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC083923.1-201ENST00000523708 376 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 OSBPL9P3-201ENST00000534523 595 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AL121766.1-201ENST00000547436 487 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 CBX3P5-201ENST00000552017 521 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDN3O15551 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC012254.4-201ENST00000588843 273 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.06□□□□□ -1.76
CLDN3O15551 AC079880.2-201ENST00000603790 1213 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 BRDTP1-201ENST00000605735 677 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN3O15551 AL118556.2-201ENST00000614375 824 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AL713922.2-201ENST00000619384 716 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 AC091905.1-201ENST00000624400 311 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN3O15551 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 XPOTP1-201ENST00000443317 2398 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 LINC00561-201ENST00000565815 2738 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 ENSAP3-201ENST00000312710 333 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 RNA5SP124-201ENST00000362739 110 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 RNU1-18P-201ENST00000363062 164 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 SNORD3H-201ENST00000384486 214 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 SNORA70E-201ENST00000384492 135 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC007066.1-201ENST00000392902 381 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 ATP5F1P4-201ENST00000397288 746 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 RPL21P17-201ENST00000397467 475 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 RPL7P60-201ENST00000397636 735 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN3O15551 HMGB3P31-201ENST00000413333 595 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 AL035423.1-201ENST00000420331 213 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 UBE2V1P5-201ENST00000440070 405 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN3O15551 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 PPIAP3-201ENST00000450588 505 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AL035407.2-201ENST00000454090 378 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 AC089999.1-201ENST00000460336 374 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 RN7SL93P-201ENST00000463035 293 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC087385.1-201ENST00000475062 312 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.05□□□□□ -1.76
CLDN3O15551 AC133963.2-201ENST00000513686 578 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC005798.1-201ENST00000513715 387 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 TRMT10BP1-201ENST00000519377 943 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 OR7E13P-201ENST00000526052 910 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.05□□□□□ -1.76
CLDN3O15551 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.05□□□□□ -1.76
CLDN3O15551 MIR1254-2-201ENST00000579553 63 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC244505.7-201ENST00000599675 272 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC245389.1-201ENST00000605141 529 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 AC006065.5-201ENST00000623427 349 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 AC020978.9-201ENST00000624380 1141 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms