Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPL35P6-201ENST00000490024 372 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM1O00151 AC093824.1-201ENST00000508796 343 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM1O00151 KRT19P6-201ENST00000510983 209 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 RN7SKP122-201ENST00000515923 296 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 RNU7-143P-201ENST00000516781 65 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 MTND1P6-201ENST00000523621 946 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM1O00151 AC092747.2-201ENST00000545069 983 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM1O00151 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM1O00151 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 AC069304.3-201ENST00000603938 1084 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 AC005014.3-201ENST00000605985 190 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 MLECP1-201ENST00000615893 709 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PDLIM1O00151 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 AL158163.1-201ENST00000603915 1649 ntBASIC3.8□□□□□ -1.8
PDLIM1O00151 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM1O00151 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
PDLIM1O00151 AL049737.1-201ENST00000413920 1403 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM1O00151 AC021755.1-201ENST00000559747 1447 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM1O00151 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PDLIM1O00151 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM1O00151 RPL32P3-201ENST00000359025 275 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 RNA5SP167-201ENST00000365461 116 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 OR6C69P-201ENST00000394268 893 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 HNRNPDP2-201ENST00000406475 478 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 RNU2-65P-201ENST00000410162 185 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 RNA5SP36-201ENST00000410197 133 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 NRBF2P2-201ENST00000413087 861 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 RPL31P45-201ENST00000419532 356 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 MFSD13B-201ENST00000420133 1290 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 NIPA2P1-201ENST00000426223 976 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 NEK4P1-201ENST00000433383 879 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC023347.2-201ENST00000433994 462 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM1O00151 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 HSFY3P-201ENST00000444242 1191 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM1O00151 RPS27P29-201ENST00000463110 252 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC109327.1-201ENST00000471666 403 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 RPS4XP6-201ENST00000477670 797 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 TXNP6-201ENST00000510190 310 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC008958.1-201ENST00000511047 682 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM1O00151 AP003355.1-201ENST00000518956 587 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 TRAV37-201ENST00000553906 342 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM1O00151 AC037471.2-201ENST00000564941 598 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 RN7SL622P-201ENST00000585292 275 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.79□□□□□ -1.8
PDLIM1O00151 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM1O00151 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM1O00151 AC009948.4-201ENST00000604692 675 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM1O00151 FAM27D1-201ENST00000612308 341 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AC008759.3-201ENST00000613300 508 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AL109620.1-201ENST00000618738 1197 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AL445567.2-201ENST00000618935 498 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 AL138960.2-201ENST00000625145 535 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 SRP72P2-201ENST00000344851 1979 ntBASIC3.79□□□□□ -1.8
PDLIM1O00151 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM1O00151 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM1O00151 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PDLIM1O00151 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 RNU1-14P-201ENST00000362759 152 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM1O00151 DNAJC19P6-201ENST00000401853 280 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 RNA5SP293-201ENST00000410527 113 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 RN7SKP235-201ENST00000410662 305 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 RAB28P1-201ENST00000411517 641 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM1O00151 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.78□□□□□ -1.8
PDLIM1O00151 COX6CP17-201ENST00000421389 185 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC246680.2-201ENST00000422106 389 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 OR5AW1P-201ENST00000426334 1006 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC008065.1-201ENST00000428525 348 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 KCTD9P3-201ENST00000434597 1169 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.78□□□□□ -1.8
PDLIM1O00151 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms