Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ELOCP29-201ENST00000588193 334 ntBASIC4.09□□□□□ -1.76
RGPD3A6NKT7 AC087241.4-201ENST00000612441 480 ntBASIC4.09□□□□□ -1.76
RGPD3A6NKT7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RGPD3A6NKT7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
RGPD3A6NKT7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RGPD3A6NKT7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
RGPD3A6NKT7 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AL445213.1-201ENST00000412589 747 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 FTLP19-201ENST00000433300 394 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AL162713.1-201ENST00000604480 262 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AL122125.1-201ENST00000616999 600 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 AF117829.1-206ENST00000621883 3802 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 PROS2P-201ENST00000474651 1951 ntBASIC4.08□□□□□ -1.76
RGPD3A6NKT7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RGPD3A6NKT7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 RSL24D1P4-201ENST00000400938 484 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 OR13C3-201ENST00000374781 1108 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 SNORD67-201ENST00000390833 111 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 RNA5SP293-201ENST00000410527 113 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 RN7SKP220-201ENST00000410611 288 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 RPL6P21-201ENST00000418672 846 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AC003685.2-201ENST00000422795 395 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 TOMM20P4-201ENST00000427861 435 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 HMGN2P7-201ENST00000456186 273 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 HMGB1P3-201ENST00000502802 616 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 VN1R78P-201ENST00000597393 564 ntBASIC4.07□□□□□ -1.76
RGPD3A6NKT7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RGPD3A6NKT7 AC005332.5-201ENST00000591222 2919 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 OR5AP1P-201ENST00000529730 940 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC009948.4-201ENST00000604692 675 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC015849.2-201ENST00000605738 409 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AL590808.1-201ENST00000618696 141 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AL158062.1-201ENST00000619632 745 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC068647.1-201ENST00000489539 2265 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AC000403.1-201ENST00000613696 3585 ntBASIC4.06□□□□□ -1.76
RGPD3A6NKT7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RGPD3A6NKT7 AL513302.2-201ENST00000562313 1842 ntBASIC4.05□□□□□ -1.76
RGPD3A6NKT7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 SNORA70B-201ENST00000384210 135 ntBASIC4.05□□□□□ -1.76
RGPD3A6NKT7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 SYT14P1-201ENST00000481459 721 ntBASIC4.05□□□□□ -1.76
RGPD3A6NKT7 AC034159.1-201ENST00000513885 583 ntBASIC4.05□□□□□ -1.76
RGPD3A6NKT7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 HMGB1P50-201ENST00000605814 607 ntBASIC4.05□□□□□ -1.76
RGPD3A6NKT7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RGPD3A6NKT7 AC000123.3-201ENST00000624029 4975 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms