Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC046144.1-201ENST00000478559 1853 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SCN1A-220ENST00000641603 12506 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SNORD35B-201ENST00000363660 87 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC019155.1-201ENST00000382242 574 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 ATP5F1P3-201ENST00000397213 657 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL079342.2-201ENST00000403367 482 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 RN7SKP199-201ENST00000410325 305 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL356320.2-201ENST00000417263 507 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL389915.1-201ENST00000422463 466 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SKP1P3-201ENST00000429280 487 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 MTND1P26-201ENST00000440488 538 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 RPS11P1-201ENST00000451072 473 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC098826.2-201ENST00000452011 651 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 MRPL42P4-201ENST00000453267 443 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 RAD23BP3-201ENST00000454157 1152 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC022795.1-201ENST00000473808 480 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 GAPDHP36-201ENST00000480688 918 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 DEFB109F-201ENST00000491870 277 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AP002812.1-201ENST00000495378 474 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 ARL4AP1-201ENST00000503220 705 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC021146.5-201ENST00000503544 545 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC118282.2-201ENST00000508739 374 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC008494.2-201ENST00000514544 370 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 RNU7-143P-201ENST00000516781 65 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC023813.2-201ENST00000564321 469 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC113368.1-201ENST00000603736 382 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC133552.5-201ENST00000604266 540 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AP005137.2-201ENST00000609238 400 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC064801.1-201ENST00000612025 407 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC090246.1-201ENST00000616499 426 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC011330.2-201ENST00000621680 635 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC109454.4-201ENST00000623411 649 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AP000676.4-201ENST00000624659 623 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC090897.3-201ENST00000636973 1157 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 AL451142.2-201ENST00000429076 2090 ntBASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
YIPF1Q9Y548 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 RNU6-636P-201ENST00000384598 107 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 SFR1P1-201ENST00000403720 688 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 VN1R8P-201ENST00000407739 893 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 RNU6ATAC-201ENST00000408749 126 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 Z95327.2-201ENST00000414579 1873 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 KRR1P1-201ENST00000419430 803 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 Z73417.1-201ENST00000447373 778 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC004022.1-201ENST00000447766 1066 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC068587.2-201ENST00000478386 781 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC015724.1-201ENST00000478577 156 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 RPL23AP44-201ENST00000482216 473 ntBASIC4.25□□□□□ -1.73
YIPF1Q9Y548 AC084024.2-201ENST00000503480 791 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms