Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC018645.2-201ENST00000609151 472 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC112484.5-201ENST00000624189 228 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 RNA5SP196-201ENST00000625967 102 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 AC006927.2-201ENST00000639256 389 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 OR5BE1P-202ENST00000641168 1176 ntBASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4BQ9Y4P1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC097504.1-201ENST00000515103 2415 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AL031985.3-201ENST00000565390 2449 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 RNU5B-4P-201ENST00000363508 111 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 SNORD74.4-201ENST00000364129 80 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 RNU6-356P-201ENST00000384140 107 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 MIR153-1-201ENST00000384914 90 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 SNORA3C-201ENST00000408792 125 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 OR4F13P-201ENST00000428478 931 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 Z77249.1-201ENST00000444622 1175 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 SEPT14P24-201ENST00000447236 180 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 RPL29P29-201ENST00000448725 423 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC087385.1-201ENST00000475062 312 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 SNX5P1-201ENST00000505757 1041 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 CYP2C60P-201ENST00000566088 139 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC022968.1-201ENST00000567372 442 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC083899.3-201ENST00000603413 594 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AP004247.3-201ENST00000608682 624 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 MIR6867-201ENST00000610636 67 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC004943.3-201ENST00000624116 600 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AL356118.1-201ENST00000635272 1078 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 AC090337.1-201ENST00000579651 2074 ntBASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG4BQ9Y4P1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RNU5B-1-201ENST00000363286 116 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC234772.1-201ENST00000377927 937 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AL603865.2-201ENST00000401679 213 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 BTBD10P2-201ENST00000404779 676 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RPL31P2-201ENST00000413849 377 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RPS15AP40-201ENST00000419621 391 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC115285.1-201ENST00000424879 736 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC011242.1-201ENST00000433596 1158 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 AC000041.1-201ENST00000439655 175 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 VN1R25P-201ENST00000443385 738 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 RPS11P1-201ENST00000451072 473 ntBASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4BQ9Y4P1 FABP3P2-201ENST00000453169 399 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms