Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC069209.1-201ENST00000619282 651 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 MIR6830-201ENST00000636015 70 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC109315.1-201ENST00000584143 1347 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC108467.2-201ENST00000617640 1597 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 Y_RNA.194-201ENST00000363985 102 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 SNORA51.12-201ENST00000384448 134 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 U3.22-201ENST00000391120 215 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AP000580.1-201ENST00000404439 358 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 TMBIM7P-201ENST00000418074 855 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AL592293.2-201ENST00000422292 996 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 RPS12P5-201ENST00000423449 371 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AL589823.1-201ENST00000429577 183 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 GEMIN8P3-201ENST00000445417 720 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AL360221.1-201ENST00000445989 335 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AL034418.1-201ENST00000448675 860 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC104306.1-201ENST00000449702 371 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 MTND1P16-201ENST00000465177 898 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 ACTG1P13-201ENST00000486987 1043 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC025164.1-201ENST00000496249 478 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 MTND3P5-201ENST00000512798 333 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 MTCYBP20-201ENST00000524239 1129 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 ATP5J2P6-201ENST00000565203 266 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AF131215.7-201ENST00000602443 707 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AP004247.3-201ENST00000608682 624 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 uc_338.9-201ENST00000617424 182 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AC018926.3-201ENST00000618841 406 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 AL607023.1-201ENST00000620045 248 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 U3.53-201ENST00000628922 216 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 CR381670.1-201ENST00000624291 1693 ntBASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX2IPQ9Y2D8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL390237.1-201ENST00000404226 1415 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 Y_RNA.311-201ENST00000365068 96 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 Y_RNA.560-201ENST00000384689 102 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL031779.1-201ENST00000415663 330 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 DNAJA1P2-201ENST00000421360 1197 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 CHIAP3-201ENST00000423668 1133 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 Z93242.1-201ENST00000427102 353 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 TPTE2P6-202ENST00000445572 1007 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC079168.2-201ENST00000453977 416 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL356981.1-201ENST00000454879 684 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 PPIAP21-201ENST00000464473 501 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC090142.1-201ENST00000465776 462 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 RPL23AP12-201ENST00000467573 473 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC147055.4-201ENST00000504399 745 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 DSTNP2-201ENST00000504533 515 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 PGBD4P4-201ENST00000509673 613 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 HMGB3P13-201ENST00000511263 607 ntBASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5□□□□□ -1.61
SSX2IPQ9Y2D8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms