Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 AC097063.1-201ENST00000426714 1797 ntBASIC7.11□□□□□ -1.27
ZC3H4Q9UPT8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 ZNF652P1-201ENST00000442420 1309 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 MIR1-2-201ENST00000384961 85 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AL360271.1-201ENST00000395679 510 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 NPM1P40-201ENST00000412758 733 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 TPMTP2-201ENST00000414372 726 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AL451054.2-201ENST00000420896 202 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 NPM1P18-201ENST00000434232 732 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC105417.1-201ENST00000514691 285 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC022616.3-201ENST00000523940 148 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 SULT1C2P1-202ENST00000562418 459 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 OR1F2P-201ENST00000570470 933 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AL713922.2-201ENST00000619384 716 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC007792.1-201ENST00000623023 402 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC091953.2-201ENST00000623979 160 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 OR2L1P-202ENST00000641567 1023 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AC087516.1-201ENST00000561236 2428 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 USP9YP4-201ENST00000424401 1745 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 AL049780.3-201ENST00000624612 1583 ntBASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.1□□□□□ -1.27
ZC3H4Q9UPT8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC006020.1-201ENST00000420179 1854 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-1309P-201ENST00000363305 108 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 Y_RNA.255-201ENST00000364581 97 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-744P-201ENST00000365557 107 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-108P-201ENST00000365558 107 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-1316P-201ENST00000384242 108 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AL133173.1-201ENST00000423458 397 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC099677.3-201ENST00000427081 395 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 SRIP2-201ENST00000428470 166 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RPS26P40-201ENST00000435209 294 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AL354710.1-201ENST00000453641 246 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC026410.2-201ENST00000460281 156 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC007547.1-201ENST00000462177 490 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RN7SL51P-201ENST00000468230 285 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 RPL31P50-201ENST00000471002 296 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 UBA52P3-201ENST00000491303 382 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC034222.1-201ENST00000494052 532 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AL671862.1-201ENST00000515851 349 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC074050.1-201ENST00000563247 211 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 SNORD39.3-201ENST00000584451 71 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC017100.2-201ENST00000584628 355 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 AC008687.2-201ENST00000597865 520 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.09□□□□□ -1.27
ZC3H4Q9UPT8 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms