Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 OR55B1P-203ENST00000641518 2602 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AL731566.1-201ENST00000620490 1937 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RNU105B-201ENST00000364478 208 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RNU6-317P-201ENST00000384031 107 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 CBX1P3-201ENST00000413296 527 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RPSAP35-201ENST00000413753 818 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RAC1P6-201ENST00000423911 575 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RPL21P91-201ENST00000429231 479 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC010881.1-201ENST00000433830 235 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RPS17P8-201ENST00000434525 335 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 MTCO3P2-201ENST00000457365 171 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC114728.1-201ENST00000488289 483 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RNU6-138P-201ENST00000515952 107 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.700-201ENST00000516806 100 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 OR4P1P-201ENST00000530808 1136 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC092447.9-201ENST00000603395 144 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC139493.1-201ENST00000604368 397 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 EIF3FP1-201ENST00000613970 806 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AL445647.2-201ENST00000615170 130 ntBASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.34□□□□□ -1.07
PHF8Q9UPP1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.08
PHF8Q9UPP1 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.34□□□□□ -1.08
PHF8Q9UPP1 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
PHF8Q9UPP1 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC233263.6-201ENST00000631132 1963 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 RNA5SP46-201ENST00000362370 120 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 RNA5SP350-201ENST00000363298 111 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 RNU6-444P-201ENST00000383988 108 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 Y_RNA.424-201ENST00000384063 103 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 MIR1302-6-201ENST00000408466 90 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC105399.1-202ENST00000447303 205 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 RN7SL57P-201ENST00000493687 290 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC116337.1-201ENST00000509680 687 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC025465.3-201ENST00000510570 311 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 RPA2P3-201ENST00000533268 770 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 FAM27E4-201ENST00000605259 342 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AL021918.2-201ENST00000613415 194 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 MIR6128-201ENST00000615528 109 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 MIR6730-201ENST00000622213 67 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms