Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL354760.1-201ENST00000608357 643 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 AL158196.1-201ENST00000616786 434 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 AC007494.3-201ENST00000624660 743 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 AC120349.2-201ENST00000625002 298 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 PCMTD1P7-201ENST00000634506 357 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 DDX18P3-201ENST00000404856 2007 ntBASIC4.65□□□□□ -1.67
VPS4AQ9UN37 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4AQ9UN37 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 DHX9P1-201ENST00000436565 3076 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL390237.1-201ENST00000404226 1415 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 CDR1-202ENST00000625883 1485 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC008549.2-201ENST00000333482 706 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 RNU6-115P-201ENST00000364310 107 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 MIR506-201ENST00000384998 124 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL121834.1-202ENST00000404494 277 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL512430.2-201ENST00000406786 339 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 NPM1P24-201ENST00000428039 894 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 IFNNP1-201ENST00000429219 553 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC010153.1-201ENST00000432862 727 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL590103.1-201ENST00000434488 307 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 MTND6P18-201ENST00000439477 513 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 OR1H1P-201ENST00000448731 937 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 MTND2P19-201ENST00000449129 1012 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 NCOR1P1-202ENST00000486162 291 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 KLRA1P-201ENST00000503499 986 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 OR7K1P-201ENST00000546439 926 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC007115.1-201ENST00000546853 234 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 ACTR3BP3-201ENST00000565577 979 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 MTCYBP28-201ENST00000566728 1132 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC017100.2-201ENST00000584628 355 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL512782.1-201ENST00000603093 364 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 MEMO1P5-201ENST00000604810 406 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC245297.2-201ENST00000610119 565 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL627230.1-201ENST00000613077 211 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AC116447.1-201ENST00000613153 453 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL591926.8-201ENST00000616876 211 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AP003072.4-201ENST00000624580 310 ntBASIC4.64□□□□□ -1.67
VPS4AQ9UN37 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4AQ9UN37 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 USP9YP4-201ENST00000424401 1745 ntBASIC4.63□□□□□ -1.67
VPS4AQ9UN37 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 LINC00561-201ENST00000565815 2738 ntBASIC4.63□□□□□ -1.67
VPS4AQ9UN37 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 AC091046.3-201ENST00000631455 1574 ntBASIC4.63□□□□□ -1.67
VPS4AQ9UN37 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS4AQ9UN37 RNU6-216P-201ENST00000363282 104 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms