Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC113192.3-201ENST00000529152 742 ntBASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCN11AQ9UI33 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 AL513175.1-201ENST00000431492 780 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 RPS6P2-201ENST00000454208 705 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 RPS3AP43-201ENST00000479743 781 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 ARL2BPP6-201ENST00000512757 439 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 AC091826.1-201ENST00000514065 313 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 MTCO1P22-201ENST00000604619 1360 ntBASIC4.09□□□□□ -1.75
SCN11AQ9UI33 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SCN11AQ9UI33 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 AL138885.1-201ENST00000405921 675 ntBASIC4.09□□□□□ -1.76
SCN11AQ9UI33 OOSP1P1-201ENST00000423265 274 ntBASIC4.09□□□□□ -1.76
SCN11AQ9UI33 AC105272.1-201ENST00000438604 198 ntBASIC4.09□□□□□ -1.76
SCN11AQ9UI33 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 AC133473.1-201ENST00000455173 299 ntBASIC4.09□□□□□ -1.76
SCN11AQ9UI33 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.76
SCN11AQ9UI33 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SCN11AQ9UI33 AC007390.2-201ENST00000606229 3803 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AL672296.1-201ENST00000427780 2158 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 MIR449A-201ENST00000362113 91 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 SNORA5B-201ENST00000363786 132 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC104297.1-201ENST00000393779 870 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 RNA5SP31-201ENST00000411144 127 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AL589765.3-201ENST00000446084 462 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 OR2A20P-203ENST00000498397 1268 ntBASIC4.08□□□□□ -1.76
SCN11AQ9UI33 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN11AQ9UI33 AC026523.2-201ENST00000625039 7739 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 MIR422A-201ENST00000362286 90 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 MTCO3P20-201ENST00000454926 688 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC135001.1-201ENST00000544546 283 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 MIR3945-201ENST00000581853 98 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 MIR7106-201ENST00000612419 65 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 SNORA71.1-201ENST00000364523 117 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
SCN11AQ9UI33 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN11AQ9UI33 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms