Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC006011.1-201ENST00000442758 349 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AL034418.1-201ENST00000448675 860 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC009220.1-201ENST00000451614 275 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 MTCO3P2-201ENST00000457365 171 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 HMGB3P30-201ENST00000457863 606 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 PNPLA4P1-201ENST00000458328 305 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC105137.1-201ENST00000484355 562 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC096571.1-202ENST00000506634 735 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 PARP4P3-201ENST00000510265 317 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 Vault.1-201ENST00000516474 102 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 MTND1P6-201ENST00000523621 946 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AL355812.1-201ENST00000603215 216 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC114878.2-201ENST00000604863 1251 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC123767.1-202ENST00000620407 817 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 AC011266.1-201ENST00000624119 3569 ntBASIC4.63□□□□□ -1.67
BLOC1S4Q9NUP1 Z99496.1-201ENST00000469424 1477 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 IQCB2P-201ENST00000401788 1633 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC116667.1-201ENST00000604855 2072 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 RNA5SP388-201ENST00000362584 119 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 RNU6-707P-201ENST00000364647 95 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 MIR513A2-201ENST00000385249 127 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 Z75741.2-201ENST00000417272 1167 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC005517.2-201ENST00000424673 553 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 C1DP1-201ENST00000426049 402 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 H2AFZP6-201ENST00000444403 394 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC004022.1-201ENST00000447766 1066 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 RPL21P131-201ENST00000497298 483 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 RPS27AP13-201ENST00000498403 237 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC069366.1-201ENST00000583159 838 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 OR1AB1P-201ENST00000585564 761 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC005255.1-201ENST00000593748 216 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC069431.2-201ENST00000604149 1099 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC112230.1-201ENST00000604342 547 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 MLECP1-201ENST00000615893 709 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 MIR8059-201ENST00000620427 81 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 OR52H1-202ENST00000641796 1061 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AC005261.4-201ENST00000600047 1385 ntBASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BLOC1S4Q9NUP1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC015813.6-201ENST00000624409 5808 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 RNU6-492P-201ENST00000363035 104 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 MIR141-201ENST00000384975 95 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 MIR122-201ENST00000385044 85 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 RN7SKP177-201ENST00000410567 355 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 RN7SKP33-201ENST00000410942 340 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AL358472.1-201ENST00000431295 329 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AC005345.1-201ENST00000431868 217 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 MTCO1P53-201ENST00000441633 699 ntBASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.61□□□□□ -1.67
BLOC1S4Q9NUP1 AP000926.1-201ENST00000479573 241 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms