Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ZNF92P3-201ENST00000596594 954 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC015726.1-201ENST00000602353 681 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 SNORA62.6-201ENST00000606322 83 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC048344.4-201ENST00000619744 527 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC091905.1-201ENST00000624400 311 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC090897.3-201ENST00000636973 1157 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC111188.2-201ENST00000529697 1387 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL049693.1-201ENST00000402760 611 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL136310.1-201ENST00000404926 654 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC002524.1-201ENST00000411687 547 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC092745.2-202ENST00000411880 369 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 OR5AW1P-201ENST00000426334 1006 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 C4BPAP2-201ENST00000428434 478 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC002542.1-201ENST00000440683 193 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 Z77249.1-201ENST00000444622 1175 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 MTCYBP42-201ENST00000444653 1130 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 HMGB3P6-201ENST00000444896 598 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC098824.1-201ENST00000453565 980 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC108941.1-201ENST00000502853 530 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AL133457.1-201ENST00000564251 987 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC120057.2-201ENST00000571520 271 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 MTCO1P40-201ENST00000574371 625 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC006338.2-201ENST00000616864 791 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 AC068057.2-201ENST00000624047 895 ntBASIC4.11□□□□□ -1.75
SIX2Q9NPC8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX2Q9NPC8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 NSRP1P1-201ENST00000444067 1693 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 SPRR2C-201ENST00000290702 219 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RNU1-87P-201ENST00000363727 170 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 SNORA62-201ENST00000365493 153 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RNA5SP283-201ENST00000365604 119 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RNU6-636P-201ENST00000384598 107 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RNU6-1242P-201ENST00000391052 103 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RPS24P7-201ENST00000416921 246 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC027644.1-201ENST00000419595 298 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC084290.1-201ENST00000434995 374 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 NANOGP2-201ENST00000435391 727 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 MTCO2P20-201ENST00000437339 673 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 EEF1A1P39-201ENST00000440791 250 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RPL21P89-201ENST00000444021 467 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 CASP3P1-201ENST00000446037 609 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC114755.5-201ENST00000447760 831 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC104108.1-201ENST00000509930 412 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC108471.1-201ENST00000513977 287 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms