Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC013562.2-201ENST00000611632 603 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 AC243773.3-201ENST00000613270 256 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 AC009878.1-201ENST00000621819 340 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VTA1Q9NP79 AC092656.1-203ENST00000624134 423 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 AC231657.1-201ENST00000624313 397 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTA1Q9NP79 OR56B2P-202ENST00000641377 2453 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
VTA1Q9NP79 SAGE4P-201ENST00000442271 3381 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VTA1Q9NP79 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VTA1Q9NP79 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
VTA1Q9NP79 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTA1Q9NP79 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VTA1Q9NP79 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTA1Q9NP79 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTA1Q9NP79 RNU4-21P-201ENST00000362802 126 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 RNU6-178P-201ENST00000384631 104 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 Y_RNA.553-201ENST00000384670 102 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTA1Q9NP79 RPL31P52-201ENST00000407532 367 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 RPS3AP9-201ENST00000417027 792 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC083875.1-201ENST00000419509 405 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC093698.1-201ENST00000423843 571 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC096632.1-201ENST00000427395 310 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 TMX2P1-201ENST00000436507 708 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 RPL23AP16-201ENST00000441715 421 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AL049874.2-201ENST00000492636 288 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 RNU6-709P-201ENST00000517257 104 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC087276.1-201ENST00000529659 480 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 LSM6P2-201ENST00000552208 177 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 ROCK1P1-201ENST00000573767 549 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 RN7SL652P-201ENST00000577769 300 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC119751.7-201ENST00000600494 245 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC073091.2-201ENST00000603205 907 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AL359535.1-201ENST00000612100 1087 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 MIR6864-201ENST00000617935 70 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC092184.1-201ENST00000625042 715 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 AC090582.1-201ENST00000636321 199 ntBASIC5.38□□□□□ -1.55
VTA1Q9NP79 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTA1Q9NP79 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VTA1Q9NP79 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VTA1Q9NP79 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC139713.2-214ENST00000642059 1811 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 MIR649-201ENST00000384843 97 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 RNU1-82P-201ENST00000390851 165 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL356967.1-201ENST00000406305 431 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 RN7SKP16-201ENST00000410180 299 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 RNA5SP296-201ENST00000410523 111 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL591848.1-201ENST00000413092 322 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 MTCO3P41-201ENST00000414801 328 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC140479.3-201ENST00000418944 1126 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL049610.1-201ENST00000423374 372 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms