Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 SNORA70C-201ENST00000384538 135 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 RPL21P65-201ENST00000406094 466 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 RNA5SP498-201ENST00000411342 120 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 LINC01881-201ENST00000416103 412 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL807761.1-201ENST00000417622 171 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 MTCO3P4-201ENST00000419236 787 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 FAR2P4-202ENST00000425399 584 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL138799.3-201ENST00000438968 350 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 RPS7P7-201ENST00000463499 571 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 CABYRP1-201ENST00000465493 1045 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC093663.2-201ENST00000484625 313 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL121766.1-201ENST00000547436 487 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL049870.4-201ENST00000555741 486 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AP003117.1-201ENST00000602771 554 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC135178.6-201ENST00000605314 398 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 MIR6830-201ENST00000636015 70 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 AC068647.1-201ENST00000489539 2265 ntBASIC3.27□□□□□ -1.89
HMG20AQ9NP66 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC138915.3-201ENST00000562908 1389 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AL121657.1-201ENST00000327215 531 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC126755.2-208ENST00000327792 462 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC138969.1-213ENST00000331436 462 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 U3.11-201ENST00000364476 212 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 RNA5SP97-201ENST00000365006 84 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 HMGB3P18-201ENST00000406327 590 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 USP9YP19-201ENST00000412165 485 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC009969.1-201ENST00000438726 172 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 RN7SL283P-201ENST00000489055 303 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC012170.1-201ENST00000495139 359 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SNX5P1-201ENST00000505757 1041 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 MTND2P31-201ENST00000512602 616 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 RN7SKP122-201ENST00000515923 296 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AL591034.3-201ENST00000605511 685 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AL354760.1-201ENST00000608357 643 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 AC090617.9-201ENST00000623751 147 ntBASIC3.26□□□□□ -1.89
HMG20AQ9NP66 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMG20AQ9NP66 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 AC091152.2-201ENST00000591628 2569 ntBASIC3.25□□□□□ -1.89
HMG20AQ9NP66 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 AC013404.1-201ENST00000413068 249 ntBASIC3.25□□□□□ -1.89
HMG20AQ9NP66 AC105402.1-201ENST00000413336 545 ntBASIC3.25□□□□□ -1.89
HMG20AQ9NP66 AL513174.1-201ENST00000423182 629 ntBASIC3.25□□□□□ -1.89
HMG20AQ9NP66 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.25□□□□□ -1.89
HMG20AQ9NP66 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms