Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AP004242.1-201ENST00000533701 349 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC036176.3-201ENST00000602456 418 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 AC140658.6-201ENST00000603958 201 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 TMC3-AS1-206ENST00000612811 2726 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 FP236240.3-201ENST00000623061 327 ntBASIC10.8□□□□□ -0.68
SCAF1Q9H7N4 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC087203.2-201ENST00000526502 1587 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 COX6B1P3-201ENST00000312310 260 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC092634.1-201ENST00000366505 199 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 MIR649-201ENST00000384843 97 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC026826.1-201ENST00000493002 361 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC091144.1-201ENST00000519573 138 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC127455.1-201ENST00000565496 145 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC023824.2-201ENST00000566185 400 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC069234.4-201ENST00000621276 412 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AL451054.1-201ENST00000621770 772 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 MIR6823-201ENST00000622118 61 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC073592.6-201ENST00000624271 415 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AC073488.2-201ENST00000631903 751 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AL354702.2-202ENST00000641481 890 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 AP000547.3-204ENST00000588548 2523 ntBASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SCAF1Q9H7N4 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 MTND5P9-201ENST00000503854 1755 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 PARP4P1-201ENST00000435945 2337 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC022034.1-201ENST00000512867 2156 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 RNU6-326P-201ENST00000365480 107 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 DPPA2P2-201ENST00000418220 897 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AL512844.2-201ENST00000433990 593 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 BX679664.1-201ENST00000434429 253 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC118758.1-202ENST00000454719 225 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 RPS16P9-201ENST00000477220 427 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 RN7SL350P-201ENST00000492591 299 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC087360.1-201ENST00000518788 616 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 MT1L-202ENST00000566367 78 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AL513218.1-201ENST00000606527 391 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 CYP3A51P-201ENST00000633513 256 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 HSPA8P11-201ENST00000508840 1898 ntBASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC10.78□□□□□ -0.68
SCAF1Q9H7N4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCAF1Q9H7N4 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC10.77□□□□□ -0.68
SCAF1Q9H7N4 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 LINC02035-201ENST00000610128 5476 ntBASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 RNA5SP435-201ENST00000364044 108 ntBASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 Y_RNA.275-201ENST00000364726 110 ntBASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 AL450124.1-201ENST00000376401 353 ntBASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 HMGN1P20-201ENST00000411849 300 ntBASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC10.77□□□□□ -0.69
SCAF1Q9H7N4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms