Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 NEK4P1-201ENST00000433383 879 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC129850.1-201ENST00000436203 508 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 COX7BP2-201ENST00000437976 242 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AP000936.2-201ENST00000447151 681 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC093899.1-201ENST00000457984 376 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC010469.1-201ENST00000463864 576 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC053481.1-201ENST00000467217 306 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 UQCRHP4-201ENST00000471686 272 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RPL23AP44-201ENST00000482216 473 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC093824.1-201ENST00000508796 343 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 OR5AK3P-201ENST00000527486 1297 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 CYCSP28-201ENST00000534284 321 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC092851.1-201ENST00000535964 478 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL031985.2-201ENST00000600955 480 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AL109618.2-201ENST00000605527 211 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC009237.15-201ENST00000610252 501 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC015813.4-201ENST00000610469 179 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC073114.1-201ENST00000612027 490 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC092794.1-201ENST00000612734 582 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
EBF3Q9H4W6 MAPK10-303ENST00000641324 3959 ntBASIC4.62□□□□□ -1.67
EBF3Q9H4W6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 CPHL1P-201ENST00000461341 3407 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RNU1-108P-201ENST00000362556 161 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RNA5SP366-201ENST00000365454 123 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RNU6-549P-201ENST00000384433 107 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RPS26P8-201ENST00000393490 348 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 ERHP2-201ENST00000402323 299 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AL133264.1-201ENST00000407157 562 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 MTND1P23-201ENST00000416931 372 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RPL7P53-201ENST00000421245 739 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC233982.1-201ENST00000451247 436 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AL035407.2-201ENST00000454090 378 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 DHFRP3-201ENST00000455595 559 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RPL7P19-201ENST00000469948 618 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 SYPL1P1-201ENST00000473622 768 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC008565.1-201ENST00000509046 885 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 PARP4P3-201ENST00000510265 317 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RNU6-720P-201ENST00000516363 108 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 RNU6-1004P-201ENST00000516584 111 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC025884.1-201ENST00000556034 378 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 ACTR3BP3-201ENST00000565577 979 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 MIR3915-201ENST00000578518 97 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AP001269.3-201ENST00000588718 329 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 VN1R88P-201ENST00000596787 292 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 VN1R85P-201ENST00000601587 426 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC024941.1-201ENST00000612250 334 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 VN1R7P-201ENST00000619242 903 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 MIR7154-201ENST00000620673 73 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AL023881.1-201ENST00000621088 301 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AL359740.1-201ENST00000624340 592 ntBASIC4.61□□□□□ -1.67
EBF3Q9H4W6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
EBF3Q9H4W6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EBF3Q9H4W6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms