Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SNORD115.1-201ENST00000391109 76 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC104297.1-201ENST00000393779 870 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AL136131.1-201ENST00000406079 803 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 MIR1305-201ENST00000408300 86 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RN7SKP266-201ENST00000410232 287 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 OR6E1P-201ENST00000414424 923 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 LSM1P1-201ENST00000438629 273 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 CALM1P1-201ENST00000442082 433 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC007677.1-201ENST00000445757 515 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RBMY2TP-201ENST00000451162 947 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 PRPF38AP1-201ENST00000451976 933 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 C1DP4-201ENST00000455429 424 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC022364.2-201ENST00000457963 554 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RN7SL515P-201ENST00000463999 297 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC022215.1-201ENST00000481770 362 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 COX6B1P2-201ENST00000489624 230 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RPL35P6-201ENST00000490024 372 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 IMPA1P1-201ENST00000510718 842 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AP003122.4-201ENST00000530980 758 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC027369.5-201ENST00000533838 755 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AP003034.1-201ENST00000534621 422 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RPL12P25-202ENST00000598100 674 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 BCRP9-201ENST00000605312 388 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AL136295.6-201ENST00000610486 658 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC138965.3-201ENST00000623875 498 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC073869.8-201ENST00000641806 335 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 AC025125.1-201ENST00000624743 1922 ntBASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FOXP3Q9BZS1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AL360270.2-201ENST00000562952 5985 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 SNORD56.2-201ENST00000363242 71 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 RN7SKP162-201ENST00000363605 345 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 Y_RNA.356-201ENST00000365475 113 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 Y_RNA.529-201ENST00000384586 119 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 SNRPEP2-201ENST00000397592 279 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 COX6CP17-201ENST00000421389 185 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 ARPC3P1-201ENST00000437218 533 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 OR6K1P-201ENST00000456766 971 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC096741.1-201ENST00000472250 846 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC017015.1-201ENST00000477387 286 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC007182.2-201ENST00000489251 402 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 IGBP1P4-201ENST00000503202 879 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 RNU2-46P-201ENST00000517038 113 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 HMGB1P42-201ENST00000532126 553 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 OR5AN2P-201ENST00000534535 896 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AL442663.2-201ENST00000554385 511 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AL049872.1-201ENST00000556323 322 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC009852.2-201ENST00000567898 485 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC005498.1-201ENST00000592125 465 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC245014.2-201ENST00000603689 287 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC246785.4-201ENST00000605374 287 ntBASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXP3Q9BZS1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms