Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC009310.1-201ENST00000414414 451 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MTCO2P27-201ENST00000420740 428 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL627308.1-201ENST00000435693 821 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 HMGB1P18-201ENST00000438801 619 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 EEF1B2P6-201ENST00000445713 673 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MEMO1P4-201ENST00000453590 386 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC023141.9-201ENST00000458734 412 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RPS27AP17-201ENST00000463344 455 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RPS23P2-201ENST00000463671 415 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MTCO2P29-201ENST00000465212 189 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC006539.1-201ENST00000481419 501 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RN7SL570P-201ENST00000484405 292 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL163540.1-201ENST00000485382 386 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC009120.1-201ENST00000493458 473 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 GAPDHP56-201ENST00000506031 988 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC105384.2-201ENST00000508433 640 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 BTF3P13-201ENST00000513224 490 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 SNORA43.3-201ENST00000517240 103 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL049872.1-201ENST00000556323 322 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC100830.2-201ENST00000581636 240 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MIR4505-201ENST00000582238 73 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC011468.4-201ENST00000603942 409 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC115621.1-201ENST00000604653 858 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC016925.2-201ENST00000605108 242 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC090425.1-201ENST00000610007 140 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MIR6768-201ENST00000610734 72 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MIR6729-201ENST00000618194 65 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC233309.1-201ENST00000619522 751 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL691477.1-201ENST00000624398 162 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC009161.2-201ENST00000624626 138 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 MTND4P35-201ENST00000604257 1375 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC005005.4-201ENST00000623789 16698 ntBASIC4.77□□□□□ -1.65
SSBP3Q9BWW4 AC005224.3-201ENST00000584683 2140 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AL161756.3-201ENST00000641216 2071 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 Y_RNA.146-201ENST00000363549 102 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RNU6-639P-201ENST00000384074 107 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 MIR143-201ENST00000385300 106 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 MIR320B1-201ENST00000390209 79 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AC068050.1-201ENST00000394891 380 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RPL23AP32-201ENST00000395315 459 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RNU2-39P-201ENST00000410604 198 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RN7SKP58-201ENST00000411010 305 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RNU6-272P-201ENST00000411028 104 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RPS6P23-201ENST00000413224 722 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 BEND7P1-201ENST00000422058 457 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AL034379.1-201ENST00000423216 253 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AC113412.1-201ENST00000425840 504 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AL662874.1-201ENST00000426065 230 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RPS3AP38-201ENST00000435889 763 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AC006335.2-201ENST00000437993 330 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 AC004129.2-201ENST00000457229 287 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 Y_RNA.639-201ENST00000458981 102 ntBASIC4.76□□□□□ -1.65
SSBP3Q9BWW4 RNU7-27P-201ENST00000459281 62 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms