Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC140134.1-201ENST00000511830 3544 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 RNU6-1249P-201ENST00000363237 111 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 Y_RNA.453-201ENST00000384223 109 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 MIR124-3-201ENST00000384866 87 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 HMGB1P20-201ENST00000402555 677 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AL080315.1-201ENST00000406055 466 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 SLC35E1P1-201ENST00000419313 864 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC092651.1-201ENST00000426110 312 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 MTCO2P11-201ENST00000431069 680 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 RPS12P17-201ENST00000438591 377 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AL353572.1-201ENST00000442490 417 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 MTND4P18-201ENST00000447010 465 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 NPM1P49-201ENST00000448027 714 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 RPS17P13-201ENST00000448974 407 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC132479.1-201ENST00000449160 144 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 FGF7P6-202ENST00000451282 293 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 YWHAEP1-201ENST00000453697 763 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC013267.1-201ENST00000458227 267 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 snoU13.29-201ENST00000459370 104 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 HMGB1P25-201ENST00000468402 607 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 RN7SL214P-201ENST00000487317 265 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC105914.1-201ENST00000511798 226 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC134698.4-201ENST00000523451 826 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 BRD9P1-201ENST00000529855 560 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 IGBP1P1-201ENST00000554337 1009 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC006254.3-201ENST00000603353 884 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 MEMO1P5-201ENST00000604810 406 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AL158211.4-201ENST00000606988 584 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 CU639417.4-201ENST00000623928 207 ntBASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRAIPQ9BWF2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 Z95114.1-201ENST00000624264 14574 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 RNA5SP132-201ENST00000364725 118 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 Y_RNA.402-201ENST00000383972 102 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 RNU6-432P-201ENST00000384196 109 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 Y_RNA.481-201ENST00000384373 102 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC092447.6-201ENST00000414578 210 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 MRPS18BP2-201ENST00000434310 759 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL731534.1-201ENST00000434711 269 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 FTH1P1-201ENST00000437933 532 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL162739.1-201ENST00000450606 307 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC093166.4-201ENST00000457867 318 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL121769.1-201ENST00000469473 401 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC023598.1-201ENST00000472521 361 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC007686.1-201ENST00000488511 463 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AK3P4-201ENST00000504283 583 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC016559.2-201ENST00000510759 359 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 ATP5LP3-201ENST00000514223 304 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC007225.2-201ENST00000562529 256 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 TXNP4-201ENST00000575018 310 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 MIR4505-201ENST00000582238 73 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms