Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-1243P-201ENST00000364028 107 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 RNA5SP240-201ENST00000365355 128 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 PCNPP3-201ENST00000393579 471 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 AL139039.1-201ENST00000401900 692 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC127537.2-201ENST00000439258 465 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AL161626.1-201ENST00000441480 490 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 RPS3AP46-201ENST00000448352 682 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 PCMTD1P1-201ENST00000455560 355 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 RN7SL325P-201ENST00000460434 283 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC006511.1-201ENST00000470614 315 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 RPL21P103-201ENST00000479921 488 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC026826.1-201ENST00000493002 361 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 RNA5SP518-201ENST00000515957 119 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 RNU6-255P-201ENST00000516957 105 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 DEFB108D-201ENST00000527787 222 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC063949.1-201ENST00000552900 865 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 FAM30C-201ENST00000561158 410 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC093227.2-201ENST00000589357 285 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 NANOGP3-201ENST00000605855 286 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AC241377.1-201ENST00000619797 406 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
USB1Q9BQ65 MFSD8-219ENST00000641228 2559 ntBASIC6.37□□□□□ -1.39
USB1Q9BQ65 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USB1Q9BQ65 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 RNU6-545P-201ENST00000362681 104 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 RNA5SP114-201ENST00000363780 113 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 SNORD113-1-201ENST00000365321 69 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 SNORA70.8-201ENST00000384231 136 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 MIR640-201ENST00000385086 96 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 MIR431-201ENST00000385266 114 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 RNU1-56P-201ENST00000391303 164 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 HMGB1P20-201ENST00000402555 677 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL662791.3-201ENST00000413771 776 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 UQCRHP1-204ENST00000424609 274 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC079781.1-201ENST00000441505 394 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC010733.1-201ENST00000451515 401 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 RNU7-169P-201ENST00000459456 61 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AP000926.1-201ENST00000479573 241 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC069499.1-201ENST00000489433 509 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 RN7SL306P-201ENST00000492941 296 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 RN7SL776P-201ENST00000493390 268 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC008496.1-201ENST00000509131 295 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 SCARNA18.2-201ENST00000516882 84 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC100870.1-201ENST00000522035 505 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL390123.1-201ENST00000603216 237 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL031777.2-201ENST00000611953 196 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL161637.1-201ENST00000622380 412 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AP001784.1-201ENST00000624107 428 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL596244.1-201ENST00000567068 3779 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 PABPC1P8-201ENST00000452851 2086 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC105749.1-201ENST00000631338 2008 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL021877.2-201ENST00000624442 10684 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AC069222.1-201ENST00000608028 3360 ntBASIC6.36□□□□□ -1.39
USB1Q9BQ65 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
USB1Q9BQ65 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USB1Q9BQ65 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
USB1Q9BQ65 AC007159.1-201ENST00000566529 4706 ntBASIC6.35□□□□□ -1.39
USB1Q9BQ65 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms