Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NANOGP10-201ENST00000453325 895 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC098824.1-201ENST00000453565 980 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 MTND2P6-201ENST00000455337 1030 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 TPRKBP1-201ENST00000456243 481 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 CEACAMP4-201ENST00000457676 421 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 U8.18-201ENST00000459285 133 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC096992.1-201ENST00000459808 709 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AL049830.2-201ENST00000480072 201 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC078817.1-201ENST00000492623 435 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 RPL5P23-201ENST00000496040 868 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 SAP18P1-201ENST00000512058 390 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC007687.1-201ENST00000602704 304 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC018618.2-201ENST00000604770 446 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC079684.1-201ENST00000621405 437 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC034229.5-201ENST00000624258 185 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 RPS4XP5-202ENST00000449995 1334 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 HMGB1P10-201ENST00000395823 563 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 RSL24D1P8-201ENST00000434442 492 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 RPL37P6-202ENST00000464216 403 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 ACTR3P3-201ENST00000480448 893 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 MTCO1P30-201ENST00000515244 580 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 SUMO2P20-201ENST00000520803 283 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AC090751.1-201ENST00000566966 267 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 MIR5187-201ENST00000583479 76 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AL391497.1-201ENST00000608671 547 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 AL121772.2-201ENST00000614331 297 ntBASIC3.87□□□□□ -1.79
RPRD1AQ96P16 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RPRD1AQ96P16 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AL133383.2-201ENST00000622958 2336 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 RNU6-252P-201ENST00000363232 107 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 SNORA62.3-201ENST00000365110 153 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 RNA5SP424-201ENST00000390988 115 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 HNRNPDP2-201ENST00000406475 478 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 RN7SKP56-201ENST00000410513 331 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 TCEA1P2-201ENST00000420496 906 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 HIGD1AP12-201ENST00000427832 281 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 ATP5HP2-201ENST00000433885 485 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 ZFAND6P1-201ENST00000434138 605 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AL691517.1-201ENST00000440833 1235 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC006480.1-201ENST00000449887 378 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 CFTRP1-201ENST00000456646 183 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 UBDP1-202ENST00000457888 382 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC025181.1-201ENST00000477507 416 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 HMGN1P11-201ENST00000508668 303 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC023141.12-201ENST00000512399 199 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC026616.1-201ENST00000523157 525 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 CIR1P1-201ENST00000524055 1133 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC093014.1-201ENST00000548926 724 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 AC135178.6-201ENST00000605314 398 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 ASNSP1-204ENST00000641977 1664 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 NMD3P1-201ENST00000439704 1488 ntBASIC3.86□□□□□ -1.79
RPRD1AQ96P16 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RPRD1AQ96P16 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.85□□□□□ -1.79
RPRD1AQ96P16 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPRD1AQ96P16 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPRD1AQ96P16 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPRD1AQ96P16 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms