Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC011978.2-201ENST00000569835 2054 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC027287.1-201ENST00000553115 1453 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 CYP2G2P-201ENST00000594920 1485 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC005839.1-201ENST00000624148 3213 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC122713.2-201ENST00000624942 3335 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 Y_RNA.65-201ENST00000362846 100 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 RNU5A-8P-201ENST00000364102 114 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 SNORA56-201ENST00000383966 129 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 RNU6-128P-201ENST00000383976 107 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 RN7SKP222-201ENST00000410651 315 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 Y_RNA.793-201ENST00000411222 111 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 NMD3P2-201ENST00000421815 761 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC008753.1-201ENST00000423096 284 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC091390.2-201ENST00000432573 374 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 FCF1P4-201ENST00000448326 183 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 PRDX1P1-201ENST00000449329 596 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC005297.2-201ENST00000450430 606 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AP006222.1-205ENST00000450734 457 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 RPL7P6-201ENST00000480903 738 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC066616.1-201ENST00000486795 413 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC020893.1-201ENST00000502452 580 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 RNU4-71P-201ENST00000516258 113 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 MIR1269B-201ENST00000580405 75 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC017100.2-201ENST00000584628 355 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 MIR5692C1-201ENST00000585309 91 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC245517.5-201ENST00000611529 162 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC007998.4-201ENST00000612496 2533 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LRCH3Q96II8 KARSP2-201ENST00000415696 1639 ntBASIC7.05□□□□□ -1.28
LRCH3Q96II8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.05□□□□□ -1.28
LRCH3Q96II8 AC015871.3-201ENST00000618835 2261 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 NAMPTP1-201ENST00000440465 2514 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AL122126.1-201ENST00000546905 1318 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC139426.3-201ENST00000605648 2059 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LRCH3Q96II8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 RNU6-1059P-201ENST00000363752 98 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 RNU6-444P-201ENST00000383988 108 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 RNU6-398P-201ENST00000384143 109 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 RNU6-1207P-201ENST00000384343 107 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 MIR613-201ENST00000385248 95 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 SNORD58.1-201ENST00000391313 66 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 MIR1204-201ENST00000408388 67 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 RPL7P46-201ENST00000425129 740 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC092651.1-201ENST00000426110 312 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC016027.5-201ENST00000427227 210 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 MTCO3P2-201ENST00000457365 171 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 SCARNA18-201ENST00000459004 134 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC108161.1-201ENST00000461060 402 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC026979.1-201ENST00000492525 396 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 TBCAP3-201ENST00000512475 312 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 Y_RNA.683-201ENST00000516508 93 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 DYNLL1P4-201ENST00000549314 266 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC074050.1-201ENST00000563247 211 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 CTSLP2-201ENST00000580501 394 ntBASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.04□□□□□ -1.28
LRCH3Q96II8 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms