Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 FGF7P2-201ENST00000332473 296 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 SNORA73.1-201ENST00000363107 205 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 SNORA4.1-201ENST00000364263 144 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 RNVU1-6-201ENST00000364688 164 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 MIR141-201ENST00000384975 95 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 RPL23AP39-201ENST00000415533 405 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 MTCO1P54-201ENST00000430139 712 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 CDY14P-201ENST00000431260 1014 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 MTND1P28-201ENST00000435623 950 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL353093.1-201ENST00000441292 436 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 CDY23P-201ENST00000451661 1014 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC073073.1-201ENST00000493920 463 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 ATP1B1P1-201ENST00000509767 915 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC074344.1-201ENST00000512823 224 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC114781.4-201ENST00000513707 639 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 RNU6-506P-201ENST00000516553 94 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC087808.1-201ENST00000520501 361 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 UBE2FP2-201ENST00000566646 462 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 BNIP3P33-201ENST00000598912 569 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC112220.3-201ENST00000605502 502 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AP001521.2-201ENST00000608772 546 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL122125.1-201ENST00000616999 600 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DDX11Q96FC9 STX3-208ENST00000641815 3236 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 AC021242.1-201ENST00000507315 2035 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 MTND4P23-201ENST00000447723 1363 ntBASIC5.79□□□□□ -1.48
DDX11Q96FC9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.79□□□□□ -1.48
DDX11Q96FC9 AL672167.1-205ENST00000641112 3080 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 Y_RNA.18-201ENST00000362461 102 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 MIR320B1-201ENST00000390209 79 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 OR6C69P-201ENST00000394268 893 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL359643.1-201ENST00000404109 423 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 RPS4XP9-201ENST00000405151 780 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 RNU2-50P-201ENST00000410494 143 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 RN7SKP222-201ENST00000410651 315 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 MTND3P21-201ENST00000433774 331 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 COX6CP12-201ENST00000446748 202 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX11Q96FC9 MTND1P16-201ENST00000465177 898 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC073522.1-201ENST00000483312 377 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 ACTG1P13-201ENST00000486987 1043 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX11Q96FC9 DYNLL1P6-201ENST00000503440 264 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 GAPDHP56-201ENST00000506031 988 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 RN7SKP31-201ENST00000516354 278 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 RPL23AP53-201ENST00000521854 457 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 IGJP1-201ENST00000522682 475 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 MIR3667-201ENST00000581025 74 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC009643.2-201ENST00000603543 1448 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL390816.3-201ENST00000604527 1066 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 AL159169.3-201ENST00000608871 561 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.78□□□□□ -1.48
DDX11Q96FC9 AC099654.14-201ENST00000638599 341 ntBASIC5.78□□□□□ -1.48
DDX11Q96FC9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms