Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR6864-201ENST00000617935 70 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RNU6-156P-201ENST00000621869 107 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC026422.1-201ENST00000623961 452 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC007529.1-201ENST00000418574 2178 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHMP4CQ96CF2 AC108751.5-201ENST00000492880 1336 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC139713.2-214ENST00000642059 1811 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 RPL32P3-201ENST00000359025 275 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 TPT1P2-201ENST00000413105 503 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC004022.2-201ENST00000413824 193 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC234779.1-201ENST00000425910 285 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 RPL36P19-201ENST00000430744 301 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 RSL24D1P3-201ENST00000449255 495 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC022795.1-201ENST00000473808 480 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC013356.1-201ENST00000489027 564 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 KLRA1P-201ENST00000503499 986 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC134698.5-201ENST00000519444 336 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AP001781.1-201ENST00000530977 207 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC091515.1-201ENST00000548110 679 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AL110118.1-201ENST00000553543 400 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC103881.1-201ENST00000603476 538 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC005191.1-201ENST00000603950 358 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 HSPE1P14-201ENST00000605812 302 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AC006270.3-201ENST00000605967 1036 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 AL158196.1-201ENST00000616786 434 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 MIR3974-201ENST00000637126 96 ntBASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHMP4CQ96CF2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 RNU1-94P-201ENST00000362627 173 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 MIR659-201ENST00000384963 97 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 RNU2-28P-201ENST00000410457 189 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC009237.10-201ENST00000414112 510 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC073136.2-201ENST00000417282 849 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC140479.3-201ENST00000418944 1126 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 TIMM9P2-201ENST00000419324 266 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC062016.2-201ENST00000420950 676 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC245028.1-201ENST00000423259 256 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AL593851.1-201ENST00000426171 157 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 RPL23AP25-201ENST00000430973 463 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 CEACAMP1-201ENST00000434624 1035 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 RPS25P9-201ENST00000435591 252 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 UBE2D3P1-201ENST00000436669 444 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 MTND2P28-201ENST00000457540 1044 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC010301.1-201ENST00000473936 355 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 HNRNPKP5-201ENST00000515300 253 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 SLC2A13P1-201ENST00000531560 322 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 MIR4504-201ENST00000577413 92 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 Z99497.2-201ENST00000603634 310 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms