Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 FAM60DP-201ENST00000524174 632 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-CQ95604 TPRX1P1-201ENST00000557620 319 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AC106782.4-201ENST00000568264 210 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-CQ95604 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 AC068768.2-201ENST00000602352 343 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AC012443.1-201ENST00000605605 231 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AL049794.2-201ENST00000616301 365 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 AL512652.1-201ENST00000619006 500 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.74□□□□□ -1.33
HLA-CQ95604 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.74□□□□□ -1.33
HLA-CQ95604 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.74□□□□□ -1.33
HLA-CQ95604 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HLA-CQ95604 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HLA-CQ95604 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 AC092821.3-202ENST00000641304 2767 ntBASIC6.74□□□□□ -1.33
HLA-CQ95604 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HLA-CQ95604 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
HLA-CQ95604 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 AC011978.2-201ENST00000569835 2054 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HLA-CQ95604 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HLA-CQ95604 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-CQ95604 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HLA-CQ95604 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 RNU1-19P-201ENST00000363306 165 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 SNORA41-201ENST00000384675 132 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-CQ95604 RPL21P112-201ENST00000434403 463 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 FTH1P20-201ENST00000434913 548 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AP000281.1-201ENST00000444036 316 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 AC104164.1-201ENST00000460282 590 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 RPL38P3-201ENST00000484463 213 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 AP002812.1-201ENST00000495378 474 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 HMGB3P17-201ENST00000504195 649 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 RNU6-1069P-201ENST00000516612 133 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 RNU4-77P-201ENST00000516692 156 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.73□□□□□ -1.33
HLA-CQ95604 RRN3P3-201ENST00000549207 578 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AC091812.1-201ENST00000432235 1948 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.73□□□□□ -1.33
HLA-CQ95604 AP003119.3-201ENST00000566747 4192 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 MTCO1P24-201ENST00000515438 1558 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 MAPK10-377ENST00000642006 2752 ntBASIC6.73□□□□□ -1.33
HLA-CQ95604 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HLA-CQ95604 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-CQ95604 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-CQ95604 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HLA-CQ95604 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HLA-CQ95604 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
HLA-CQ95604 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-CQ95604 RN7SKP160-201ENST00000363804 340 ntBASIC6.72□□□□□ -1.33
HLA-CQ95604 RNU4-2-201ENST00000365668 141 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms